Miyakogusa Predicted Gene

Lj4g3v2215330.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215330.2 tr|G7JS37|G7JS37_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula
GN=MTR_4g12,90.18,0,coiled-coil,NULL; Sec34,Conserved oligomeric Golgi
complex, subunit 3; SUBFAMILY NOT NAMED,NULL; CON,CUFF.50514.2
         (783 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04990.1                                                      1428   0.0  
Glyma09g26320.1                                                       295   1e-79
Glyma09g24850.1                                                       178   2e-44

>Glyma17g04990.1 
          Length = 784

 Score = 1428 bits (3696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/790 (88%), Positives = 732/790 (92%), Gaps = 13/790 (1%)

Query: 1   MGSRGPPPQSHPNSAAISRGYNFAFTWEQNAPLTEHQQAAISSLSHAVSERPLPLK---- 56
           MGSRGPP QSHPNSAAIS+GYNFA TWEQNAPLTE QQ AI SLSHAVSERPLPLK    
Sbjct: 1   MGSRGPP-QSHPNSAAISKGYNFASTWEQNAPLTEQQQFAIVSLSHAVSERPLPLKLVRF 59

Query: 57  ---HAQEIASVQENTLSVKTEDNCFDDSGAIQAVMVNTNQFYKWFMDLESAMKSETEEKY 113
              HAQE ASVQ+N LSVKT+D+  DDSG I+ VMVNTNQFYKWF DLESAMKSE   + 
Sbjct: 60  CHLHAQENASVQDNALSVKTKDSSVDDSGTIETVMVNTNQFYKWFTDLESAMKSEVNRRE 119

Query: 114 QHYVNTLTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDRMVQEKQRLI 173
              V+TL E   T     + VDDTLDLFNELQLQHQAVATKTKTLHDACDR++QEKQRLI
Sbjct: 120 ---VSTLREHSNTI--AYRHVDDTLDLFNELQLQHQAVATKTKTLHDACDRLLQEKQRLI 174

Query: 174 DFAEALRSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSV 233
           DFAEALRSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVE+NPQYAESSV
Sbjct: 175 DFAEALRSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVENNPQYAESSV 234

Query: 234 YLLKFRQLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGDGKTSISEGVEASVIYVRFKA 293
           YLLKFRQLQSRALGMMRSHVLAVLKGASSQVQEAIRGSG GK SISEGVEASVIYVRFKA
Sbjct: 235 YLLKFRQLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGGGKASISEGVEASVIYVRFKA 294

Query: 294 AASELKPLLEEIESRSSRKEYGQILAECHRLYCEQRLSLIRAIVQRRISEFSKKESLPSL 353
           AASELKPLLEEIESRSSR+EYGQILAECHRLYCEQRLSLIRAIVQRRISEF+KKESLPSL
Sbjct: 295 AASELKPLLEEIESRSSRREYGQILAECHRLYCEQRLSLIRAIVQRRISEFAKKESLPSL 354

Query: 354 TRSGCAYLIQVCQLEHQLFDHFFPVSSKDISSLAPLMDPLSTYLYDTLRPKIVHETNIDF 413
           TRSGCAYLIQVCQLEHQLFDHFFP SSKDISSLAPLMDPLSTYLYDTLRPK+VHETNIDF
Sbjct: 355 TRSGCAYLIQVCQLEHQLFDHFFPASSKDISSLAPLMDPLSTYLYDTLRPKLVHETNIDF 414

Query: 414 LCELVDILRMEVLGEHHSRRSESLAGLRPTFERILADVHERLTFRARTHVRDEIANYIPT 473
           LCELVDIL+MEVLGE HSRRSESLAGLRPTFERILADVHERLTFRARTH+RDEIANY+PT
Sbjct: 415 LCELVDILKMEVLGEQHSRRSESLAGLRPTFERILADVHERLTFRARTHIRDEIANYMPT 474

Query: 474 NEDLDYPERLKRSADSTSEINPADDNPDISKTWYPPLEKTLACLSKLYRCLESEVFTGLA 533
           NEDLDYPE+LKRSA+STSEINP DDNPDI KTWYPPLEKTL+CLSKLYRCLES VFTGLA
Sbjct: 475 NEDLDYPEKLKRSAESTSEINPTDDNPDIFKTWYPPLEKTLSCLSKLYRCLESAVFTGLA 534

Query: 534 QEAVEVCSTSIQKASKLIAKRSSQMDGQLFLIKHLLILREQIAPFNIEFSVTQKELDFSX 593
           QEAVEVCSTSIQKASKLIAKRSSQMDGQLFLIKHLLILREQIAPFNIEFSVTQKELDFS 
Sbjct: 535 QEAVEVCSTSIQKASKLIAKRSSQMDGQLFLIKHLLILREQIAPFNIEFSVTQKELDFSH 594

Query: 594 XXXXXXXXXXGQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMAVTK 653
                     GQASLF+WSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIM+VTK
Sbjct: 595 LLEHLRRLLRGQASLFEWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMSVTK 654

Query: 654 LVVDPLLSFVTKVTAVKVALSSGGQNQKLESLMAKPLKDQAFASPDKVAELVQKVRTAIQ 713
           LVVDPLLSFVTKVTAVKVALSSGGQNQKLES+MAKPLKDQAFA+PDKVAELVQKVR AIQ
Sbjct: 655 LVVDPLLSFVTKVTAVKVALSSGGQNQKLESVMAKPLKDQAFATPDKVAELVQKVRNAIQ 714

Query: 714 EQLPVVIEKMKLYLQNSSTRTILFKPIKTNIVEAHTQIQSLLQSEYTSEDIQIINLKSVQ 773
           EQLP VI++MKLYLQNSSTRTILFKPIKTNI+EAHTQ+QSLLQSEYTSE+IQIINLKS+Q
Sbjct: 715 EQLPGVIDRMKLYLQNSSTRTILFKPIKTNIIEAHTQVQSLLQSEYTSEEIQIINLKSIQ 774

Query: 774 DLQTELDNLL 783
           DLQ ELDN L
Sbjct: 775 DLQNELDNFL 784


>Glyma09g26320.1 
          Length = 232

 Score =  295 bits (755), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 145/184 (78%), Positives = 156/184 (84%), Gaps = 16/184 (8%)

Query: 390 MDPLSTYLYDTLRPKIVHETNIDFLCELVDILRMEVLGEHHSRRSESLAGLRPTFERILA 449
           MDPLSTYLYDTL PK+VHETNIDFLC+L+DIL+MEVLGE HSRRSESLAGLRPTFERIL 
Sbjct: 1   MDPLSTYLYDTLHPKVVHETNIDFLCDLLDILKMEVLGEQHSRRSESLAGLRPTFERILV 60

Query: 450 DVHERLTFRARTHVRDEIANYIPTNEDLDYPERLKRSADSTSEINPADDNPDISKTWYPP 509
           DVHER TFRA+TH+RDEI NY+PTNEDLDYPE+ KR A+STSE N               
Sbjct: 61  DVHERFTFRAQTHIRDEIVNYMPTNEDLDYPEKQKRYAESTSETN--------------- 105

Query: 510 LEKTLACLSKLYRCLESEVFTGLAQEAVEVCSTSIQKASKLIAKRSSQMDGQLFLIKHLL 569
             KTL+CLSKLYRCL S VFT LAQEAVEVC+TSIQKASKLIAKRSSQMDGQLFLIKHLL
Sbjct: 106 -SKTLSCLSKLYRCLVSVVFTSLAQEAVEVCTTSIQKASKLIAKRSSQMDGQLFLIKHLL 164

Query: 570 ILRE 573
           ILRE
Sbjct: 165 ILRE 168


>Glyma09g24850.1 
          Length = 164

 Score =  178 bits (452), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/122 (77%), Positives = 95/122 (77%), Gaps = 17/122 (13%)

Query: 228 YAESSVYLLKFRQLQ-----------------SRALGMMRSHVLAVLKGASSQVQEAIRG 270
           YAESSVYLLKFRQLQ                 SRALGMMRS+ L VLKGASSQ QEAIRG
Sbjct: 43  YAESSVYLLKFRQLQIYKFYYYELSLSYDISLSRALGMMRSNALVVLKGASSQFQEAIRG 102

Query: 271 SGDGKTSISEGVEASVIYVRFKAAASELKPLLEEIESRSSRKEYGQILAECHRLYCEQRL 330
           SG GK  ISEGVEA VIYVRFK A SELKPLLEEIESRSSRKEYGQILAECHRLYCEQ L
Sbjct: 103 SGGGKACISEGVEAFVIYVRFKVATSELKPLLEEIESRSSRKEYGQILAECHRLYCEQCL 162

Query: 331 SL 332
           SL
Sbjct: 163 SL 164