Miyakogusa Predicted Gene

Lj4g3v2215060.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215060.2 Non Chatacterized Hit- tr|I1KR37|I1KR37_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82.5,0.0000000004,seg,NULL,CUFF.50485.2
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07780.1                                                        49   2e-06

>Glyma08g07780.1 
          Length = 186

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 26/40 (65%)

Query: 1  MISVTXXXXXXXXXXXXVPVGMSMLEATNENDIELEGNSY 40
          MISVT            VPVGMSMLEA +ENDIELEG S+
Sbjct: 39 MISVTFIDKDGEEKHIKVPVGMSMLEAAHENDIELEGKSF 78