Miyakogusa Predicted Gene
- Lj4g3v2191490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2191490.1 Non Chatacterized Hit- tr|C6TAS3|C6TAS3_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,49.15,7e-18,RNI-like,NULL; GB DEF: HYPOTHETICAL PROTEIN
AT2G06040,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL;
,gene.Ljchr4_pseudomol_20120830.path1.gene6060.1
(218 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g05740.1 241 4e-64
Glyma13g16980.1 182 3e-46
Glyma09g08060.1 150 7e-37
Glyma15g19540.1 95 6e-20
Glyma13g09290.2 52 7e-07
Glyma13g09290.1 52 7e-07
Glyma06g12640.2 50 2e-06
Glyma06g12640.1 50 2e-06
Glyma09g15970.1 49 3e-06
Glyma04g42160.2 49 4e-06
Glyma04g42160.1 49 4e-06
Glyma20g23570.1 49 5e-06
Glyma14g26660.1 49 5e-06
>Glyma17g05740.1
Length = 675
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 150/215 (69%), Gaps = 37/215 (17%)
Query: 3 RNLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSI 62
R LT+AS++ IAE CPGL ALDL NL KLTDLS+ YLTNSCQ LRTLKL RN F
Sbjct: 496 RKLTDASIKVIAEHCPGLCALDLMNLDKLTDLSLGYLTNSCQALRTLKLCRNLF------ 549
Query: 63 TLLFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIASFLEIIGGSLEELSLNNIKKVGQ 122
DEAIA+FLEI G SL+ELSLNNIKKVG
Sbjct: 550 -------------------------------SDEAIAAFLEITGESLKELSLNNIKKVGH 578
Query: 123 HTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGYSN 182
HT +SLA HA+NLHTLDLSWCRN++D ELG IVDSCFSL+LLKLFGCS VT +FLNG+SN
Sbjct: 579 HTTISLARHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSN 638
Query: 183 PKIQIIGVKLTLLFQHIEVLERPQGALRYSSVSFN 217
P+IQI+G+K++ L Q+++V E QG LRYS VS +
Sbjct: 639 PEIQILGLKMSPLLQNVKVPEPYQGPLRYSPVSVD 673
>Glyma13g16980.1
Length = 573
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 135/219 (61%), Gaps = 28/219 (12%)
Query: 3 RNLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFR----- 57
R LT+AS++ +AE CPGL ALDL NL KLTDLS+ YLTNSC+ L TLKL NPF
Sbjct: 360 RKLTDASIKGVAEHCPGLCALDLMNLDKLTDLSLGYLTNSCRALHTLKLCHNPFSDEAIA 419
Query: 58 -------------CLSSITLLFARDDDMLL-----CSLQEMMTYLWEFLGFLTGCDEAIA 99
L++I L RD + SL E M + + C E ++
Sbjct: 420 AFLEITGVSLKELSLNNIKKLLGRDKKLRTLLSRGSSLCEGMGEGYCTQPYPCICKETVS 479
Query: 100 SFLEIIGGSLEELSLNNIKKVGQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCF 159
F + S +N +G HT +SLA HA+NLH LDLSWCRN++D ELG IVDSCF
Sbjct: 480 GFEPMTNKS----PRHNFG-LGHHTTLSLARHAKNLHILDLSWCRNLTDNELGFIVDSCF 534
Query: 160 SLKLLKLFGCSQVTSIFLNGYSNPKIQIIGVKLTLLFQH 198
SL+LLK+FGCS VT +FLNG+SNP+IQI+G+K++ L Q+
Sbjct: 535 SLRLLKIFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQN 573
>Glyma09g08060.1
Length = 290
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 37/164 (22%)
Query: 4 NLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSIT 63
NLTNAS++AI E CP L LDL NL KLTDLSI +LTN C L TLKL RNPF
Sbjct: 132 NLTNASIKAIVEHCPRLSVLDLMNLHKLTDLSIGHLTNGCCALHTLKLCRNPFS------ 185
Query: 64 LLFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIASFLEIIGGSLEELSLNNIKKVGQH 123
DEAIA+F+E GGSL+ELSLNNIK+VG
Sbjct: 186 -------------------------------DEAIAAFVETTGGSLKELSLNNIKRVGYL 214
Query: 124 TAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLF 167
T +SLA HA+NLH+L+LS CRN++D LGLIVDSC +L+ LKLF
Sbjct: 215 TTLSLANHAKNLHSLNLSSCRNLTDNALGLIVDSCLALRSLKLF 258
>Glyma15g19540.1
Length = 667
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 65/117 (55%), Gaps = 37/117 (31%)
Query: 4 NLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSIT 63
NLT+AS++AI E CPGL LDL NL KLTDLSI +L N C+ L TLKL RNPF
Sbjct: 582 NLTDASIKAIVEHCPGLCVLDLMNLHKLTDLSIGHLANGCRALHTLKLCRNPF------- 634
Query: 64 LLFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIASFLEIIGGSLEELSLNNIKKV 120
DEAIA+F+E GGSL+ELSLNNIKKV
Sbjct: 635 ------------------------------SDEAIAAFVETTGGSLKELSLNNIKKV 661
>Glyma13g09290.2
Length = 375
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ I+ C LQ LDL+ KLTD S+ + CQ+L L +I+
Sbjct: 119 LEDNAVETISNFCHDLQILDLSKSFKLTDHSLYAIALGCQDLTKL-----------NISG 167
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLT-----GCDEAIA-SFLEIIG---GSLEELSLN 115
A D+ L YL F L GC +A + + L+ IG L+ L+L
Sbjct: 168 CSAFSDNAL--------AYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLG 219
Query: 116 NIKKVGQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSI 175
+ V +SLA+ R+L TLDL C ++D+ + + + C L+ L L+ C +T
Sbjct: 220 WCENVSDVGVMSLAYGCRDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYFCQNITDR 279
Query: 176 FLNGYSNPKI 185
+ + K+
Sbjct: 280 AMYSLAQSKV 289
>Glyma13g09290.1
Length = 375
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ I+ C LQ LDL+ KLTD S+ + CQ+L L +I+
Sbjct: 119 LEDNAVETISNFCHDLQILDLSKSFKLTDHSLYAIALGCQDLTKL-----------NISG 167
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLT-----GCDEAIA-SFLEIIG---GSLEELSLN 115
A D+ L YL F L GC +A + + L+ IG L+ L+L
Sbjct: 168 CSAFSDNAL--------AYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLG 219
Query: 116 NIKKVGQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSI 175
+ V +SLA+ R+L TLDL C ++D+ + + + C L+ L L+ C +T
Sbjct: 220 WCENVSDVGVMSLAYGCRDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYFCQNITDR 279
Query: 176 FLNGYSNPKI 185
+ + K+
Sbjct: 280 AMYSLAQSKV 289
>Glyma06g12640.2
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ IA+ C LQ LDL+ KLTD S+ L C++L L + S
Sbjct: 118 LEDNAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCRDLTKLNI---------SGCS 168
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIA-SFLEIIG---GSLEELSLNNIKKV 120
F+ + L S + L L GC A + + L+ IG L+ L+L V
Sbjct: 169 AFSDNALAYLASFCRKLKVL-----NLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNV 223
Query: 121 GQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGY 180
G +LA+ +L +DL C ++D+ + + C L+ L L+ C +T +
Sbjct: 224 GDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSL 283
Query: 181 SNPKIQ 186
++ K+
Sbjct: 284 AHSKVN 289
>Glyma06g12640.1
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ IA+ C LQ LDL+ KLTD S+ L C++L L + S
Sbjct: 118 LEDNAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCRDLTKLNI---------SGCS 168
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIA-SFLEIIG---GSLEELSLNNIKKV 120
F+ + L S + L L GC A + + L+ IG L+ L+L V
Sbjct: 169 AFSDNALAYLASFCRKLKVL-----NLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNV 223
Query: 121 GQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGY 180
G +LA+ +L +DL C ++D+ + + C L+ L L+ C +T +
Sbjct: 224 GDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSL 283
Query: 181 SNPKIQ 186
++ K+
Sbjct: 284 AHSKVN 289
>Glyma09g15970.1
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 39/171 (22%)
Query: 3 RNLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSI 62
+N+++ Q +A+ P L++L+LT KLTD ++ L + C L++L L LSS
Sbjct: 174 KNISDQGAQLVADNYPELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNL-----YALSSF 228
Query: 63 TLLFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIASFLEIIGGSLEELSLNNIKKVGQ 122
T D+ + C A FL++ G + LS
Sbjct: 229 T------DE-----------------AYRKICLLARLKFLDLCGA--QNLS--------- 254
Query: 123 HTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVT 173
A+S +NL +L+L+WC V+DE + I C SL+ L LFG VT
Sbjct: 255 DEALSCISKCKNLESLNLTWCVRVTDEGVISIAKGCTSLEFLSLFGIVGVT 305
>Glyma04g42160.2
Length = 321
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ IA+ C LQ LDL+ KLTD S+ L C++L L + S
Sbjct: 68 LEDNAVETIAKCCHELQILDLSKSFKLTDHSLYELALGCRDLTKLNI---------SGCS 118
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIA-SFLEIIG---GSLEELSLNNIKKV 120
F+ + L S + L L GC A + + L+ IG L+ L+L V
Sbjct: 119 AFSDNALAYLASFCRKLKVL-----NLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNV 173
Query: 121 GQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGY 180
G +LA+ +L +DL C ++D+ + + C L+ L L+ C +T +
Sbjct: 174 GDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSL 233
Query: 181 SNPKI 185
++ K+
Sbjct: 234 AHSKV 238
>Glyma04g42160.1
Length = 321
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ IA+ C LQ LDL+ KLTD S+ L C++L L + S
Sbjct: 68 LEDNAVETIAKCCHELQILDLSKSFKLTDHSLYELALGCRDLTKLNI---------SGCS 118
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIA-SFLEIIG---GSLEELSLNNIKKV 120
F+ + L S + L L GC A + + L+ IG L+ L+L V
Sbjct: 119 AFSDNALAYLASFCRKLKVL-----NLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNV 173
Query: 121 GQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGY 180
G +LA+ +L +DL C ++D+ + + C L+ L L+ C +T +
Sbjct: 174 GDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITDRAMYSL 233
Query: 181 SNPKI 185
++ K+
Sbjct: 234 AHSKV 238
>Glyma20g23570.1
Length = 418
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 3 RNLTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSI 62
R +T+ ++A+++ C L+ L L +TD + L + C+ +R L + + C ++
Sbjct: 173 RFVTDGVLEALSKNCGNLEELGLHGCTSITDNGLINLASGCRRIRFLDINK----CSNAT 228
Query: 63 TLLFARDDDMLLCSLQEMMTYLWEFLGFLTGCDEAIASFLEIIGGSLEELSLNNIKKVGQ 122
+ + SL+ + +G DE I S E G +LE L + + V
Sbjct: 229 DVGVSSVSRACSSSLKTLKLLDCYKIG-----DETILSLAEFCG-NLETLIIGGCRDVSA 282
Query: 123 HTAVSLAWH-ARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSIFLNGYS 181
SLA +L L + WC N+SD L ++ C +L+ L + C ++T S
Sbjct: 283 DAIRSLAAACGSSLKNLRMDWCLNISDSSLSCVLSQCRNLEALDIGCCEELTDAAFQLLS 342
Query: 182 N---------------PKIQIIGVKLTL----LFQHIEVLERPQ 206
N PKI + G+ + + Q+++V P
Sbjct: 343 NEEPGLSLKILKISNCPKITVAGIGIIVGKCTSLQYLDVRSCPH 386
>Glyma14g26660.1
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 5 LTNASVQAIAEQCPGLQALDLTNLCKLTDLSIEYLTNSCQELRTLKLGRNPFRCLSSITL 64
L + +V+ IA C LQ LDL+ KLTD S+ + C++L L +I+
Sbjct: 118 LEDNAVETIANFCHDLQILDLSKSFKLTDRSLYAVALGCRDLTKL-----------NISG 166
Query: 65 LFARDDDMLLCSLQEMMTYLWEFLGFLT-----GCDEAIA-SFLEIIG---GSLEELSLN 115
A D+ L YL F L GC +A + + L+ IG L+ L+L
Sbjct: 167 CSAFSDNAL--------AYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLG 218
Query: 116 NIKKVGQHTAVSLAWHARNLHTLDLSWCRNVSDEELGLIVDSCFSLKLLKLFGCSQVTSI 175
+ V +SLA+ +L TLDL C ++D+ + ++ + C L+ L L+ C +T
Sbjct: 219 WCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIVLANRCPHLRSLGLYYCQSITDK 278
Query: 176 FLNGYSNPKI 185
+ + K+
Sbjct: 279 AMYSLAQSKL 288