Miyakogusa Predicted Gene

Lj4g3v2180380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2180380.1 Non Chatacterized Hit- tr|Q8S8F0|Q8S8F0_ARATH
Putative uncharacterized protein At2g28020
OS=Arabidop,59.09,0.000000000000003,Med20,Mediator complex, subunit
Med20; SUBFAMILY NOT NAMED,NULL; UBIQUITIN SPECIFIC PROTEASE
HOMOLOG,CUFF.50440.1
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g05810.1                                                       372   e-103
Glyma13g16910.1                                                       370   e-103
Glyma13g16910.2                                                       249   2e-66
Glyma11g21760.1                                                        96   3e-20
Glyma18g13030.1                                                        84   8e-17

>Glyma17g05810.1 
          Length = 218

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/218 (79%), Positives = 197/218 (90%)

Query: 1   MPIRWILHWQPHQGTVVNSHTLNEISQCVENINGVKDGRWKSTLTFYRPNLRDQSIATDF 60
           MPIR ILHWQP+QG+VVNS  LNEISQCVE++NGVK+GR K++LTFYRPNLRDQS+  DF
Sbjct: 1   MPIRCILHWQPNQGSVVNSQVLNEISQCVESLNGVKEGRCKASLTFYRPNLRDQSVTIDF 60

Query: 61  PRDFLGISLMEQPTKYYFIIRGHKIVVEADSSILTIMEKLQSYKSKVALNFEGVQYKLGD 120
           PRDFLGIS++EQP KYYFIIRG KIV+EADSSIL IMEKLQSYKSKVAL+FEGV YKLGD
Sbjct: 61  PRDFLGISMLEQPNKYYFIIRGQKIVLEADSSILLIMEKLQSYKSKVALHFEGVLYKLGD 120

Query: 121 FQLRVIKVVPNQAENLRGILMEIEYLPISSVEKSRPIMEEFIEIWREVLSKKSLPGHFMR 180
           FQ+RVIKVVP+QAE+LRGI++EIEYLPISSVEKS+ I+EEFI+IW+EV+SKKSL G FM 
Sbjct: 121 FQMRVIKVVPSQAESLRGIMIEIEYLPISSVEKSKQILEEFIDIWKEVVSKKSLAGQFMH 180

Query: 181 AEPNFKEYGLGDTYTPQHTAVQYAAALAQLIASVQLRN 218
            EPN+ EYGL D YT QHTAVQYAAALAQLI S QLRN
Sbjct: 181 TEPNYAEYGLSDNYTSQHTAVQYAAALAQLIQSAQLRN 218


>Glyma13g16910.1 
          Length = 218

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 173/218 (79%), Positives = 196/218 (89%)

Query: 1   MPIRWILHWQPHQGTVVNSHTLNEISQCVENINGVKDGRWKSTLTFYRPNLRDQSIATDF 60
           MPIR ILHWQP+QG+VVNS  LNEISQCVE++NGVK+GR K++LTFYRPNLRDQS+  DF
Sbjct: 1   MPIRCILHWQPNQGSVVNSQVLNEISQCVESLNGVKEGRCKASLTFYRPNLRDQSVTIDF 60

Query: 61  PRDFLGISLMEQPTKYYFIIRGHKIVVEADSSILTIMEKLQSYKSKVALNFEGVQYKLGD 120
           PRDFLGIS++EQP KYY IIRG KIV+EADSSIL IMEKLQSYKSKVAL+FEGV YKLGD
Sbjct: 61  PRDFLGISMLEQPNKYYLIIRGQKIVLEADSSILLIMEKLQSYKSKVALHFEGVLYKLGD 120

Query: 121 FQLRVIKVVPNQAENLRGILMEIEYLPISSVEKSRPIMEEFIEIWREVLSKKSLPGHFMR 180
           FQ+RVIKVVP+QAE+LRGI++EIEYLPISSVEKS+ I+EEFI+IW+EV+SKKSL G FM 
Sbjct: 121 FQIRVIKVVPSQAESLRGIMIEIEYLPISSVEKSKQILEEFIDIWKEVVSKKSLAGQFMH 180

Query: 181 AEPNFKEYGLGDTYTPQHTAVQYAAALAQLIASVQLRN 218
            EPN+ EYGL D YT QHTAVQYAAALAQLI S QLRN
Sbjct: 181 TEPNYAEYGLSDNYTSQHTAVQYAAALAQLIQSAQLRN 218


>Glyma13g16910.2 
          Length = 156

 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 115/143 (80%), Positives = 132/143 (92%)

Query: 1   MPIRWILHWQPHQGTVVNSHTLNEISQCVENINGVKDGRWKSTLTFYRPNLRDQSIATDF 60
           MPIR ILHWQP+QG+VVNS  LNEISQCVE++NGVK+GR K++LTFYRPNLRDQS+  DF
Sbjct: 1   MPIRCILHWQPNQGSVVNSQVLNEISQCVESLNGVKEGRCKASLTFYRPNLRDQSVTIDF 60

Query: 61  PRDFLGISLMEQPTKYYFIIRGHKIVVEADSSILTIMEKLQSYKSKVALNFEGVQYKLGD 120
           PRDFLGIS++EQP KYY IIRG KIV+EADSSIL IMEKLQSYKSKVAL+FEGV YKLGD
Sbjct: 61  PRDFLGISMLEQPNKYYLIIRGQKIVLEADSSILLIMEKLQSYKSKVALHFEGVLYKLGD 120

Query: 121 FQLRVIKVVPNQAENLRGILMEI 143
           FQ+RVIKVVP+QAE+LRGI++EI
Sbjct: 121 FQIRVIKVVPSQAESLRGIMIEI 143


>Glyma11g21760.1 
          Length = 59

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query: 54  QSIATDFPRDFLGISLMEQPTKYYFIIRGHKIVVEADSSILTIMEKLQSYKSKVALNFE 112
           QS+  DFP DFLGIS++EQP KYYFII GHKIV+E DSSIL IMEKLQSY SKVAL+F+
Sbjct: 1   QSVTIDFPCDFLGISMLEQPNKYYFIICGHKIVLEVDSSILLIMEKLQSYNSKVALHFK 59


>Glyma18g13030.1 
          Length = 129

 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 20/85 (23%)

Query: 64  FLGISLMEQPTKYYFIIRGHKIVVEADSSILTIMEKLQSYKSKVALNFEGVQYKLGDFQL 123
           FLGIS++EQ  KYYFIIRGHKIV+EADSSIL IMEKL               Y  G    
Sbjct: 42  FLGISMLEQLNKYYFIIRGHKIVLEADSSILLIMEKL---------------YATG---- 82

Query: 124 RVIKVVPNQAENLRGILMEIEYLPI 148
            +IKVVP+QAE+LRGI++E+  L I
Sbjct: 83  -IIKVVPSQAESLRGIMIEVCQLGI 106