Miyakogusa Predicted Gene

Lj4g3v2179260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2179260.1 Non Chatacterized Hit- tr|K3ZXA5|K3ZXA5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031237,64.06,2e-19,seg,NULL; GCK,GCK;
coiled-coil,NULL,CUFF.50426.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g04230.1                                                       117   2e-27

>Glyma20g04230.1 
          Length = 183

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 54/58 (93%)

Query: 36  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           CGFCLFMKGGGC+D FI WENCVQEAE NNEDL+EKCAQVTA LK+CMDAH+DYYEPI
Sbjct: 60  CGFCLFMKGGGCRDEFIGWENCVQEAENNNEDLLEKCAQVTAALKRCMDAHSDYYEPI 117