Miyakogusa Predicted Gene

Lj4g3v2172560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2172560.1 tr|G7IIL3|G7IIL3_MEDTR RecA OS=Medicago
truncatula GN=MTR_2g039670 PE=3 SV=1,79.43,0,RECA,DNA recombination
and repair protein RecA; RecA,DNA recombination and repair protein
RecA; RECA,CUFF.50383.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06180.2                                                       395   e-110
Glyma17g06180.1                                                       394   e-110
Glyma09g07400.1                                                       352   3e-97
Glyma15g18590.1                                                       348   3e-96
Glyma13g16490.1                                                       320   9e-88
Glyma19g31600.1                                                       173   2e-43
Glyma15g27640.1                                                       162   5e-40

>Glyma17g06180.2 
          Length = 423

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/296 (68%), Positives = 219/296 (73%), Gaps = 16/296 (5%)

Query: 9   HAGYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXX 68
             GYC FVDAEHALD+TLAESIGVNT NLLLSQPDCGEQALSLVDTLIRSG         
Sbjct: 128 QGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 187

Query: 69  XXXXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGF 128
                PKGELDGEMGDAHMAMQARLMSQA               IFINQVRSKISTFGGF
Sbjct: 188 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQTILIFINQVRSKISTFGGF 247

Query: 129 GGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAPPFKTAEFEL 188
            GPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEI+GSQV+VKVVKNKLAPPFKTAEFEL
Sbjct: 248 SGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFEL 307

Query: 189 QFGKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAENPTAXXXXXXXX 248
           QFGKGI ++ EII LS+ +KLI+KAG+M+YYNE SFRG DALK+FLAEN +A        
Sbjct: 308 QFGKGICKETEIIDLSVNHKLISKAGAMFYYNEHSFRGKDALKNFLAENRSALEELEMKL 367

Query: 249 XXXXXNPETEKVPESD----------------SGEVLEEIATLDSTDEETAVVVEA 288
                N ETEK+ ESD                +  V E+IAT+DSTDEE A +VEA
Sbjct: 368 REKLLNAETEKMQESDVINGYVTEEIATVDSTNDNVTEKIATVDSTDEEAAAIVEA 423


>Glyma17g06180.1 
          Length = 459

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/296 (68%), Positives = 219/296 (73%), Gaps = 16/296 (5%)

Query: 9   HAGYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXX 68
             GYC FVDAEHALD+TLAESIGVNT NLLLSQPDCGEQALSLVDTLIRSG         
Sbjct: 164 QGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 223

Query: 69  XXXXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGF 128
                PKGELDGEMGDAHMAMQARLMSQA               IFINQVRSKISTFGGF
Sbjct: 224 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQTILIFINQVRSKISTFGGF 283

Query: 129 GGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAPPFKTAEFEL 188
            GPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEI+GSQV+VKVVKNKLAPPFKTAEFEL
Sbjct: 284 SGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFEL 343

Query: 189 QFGKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAENPTAXXXXXXXX 248
           QFGKGI ++ EII LS+ +KLI+KAG+M+YYNE SFRG DALK+FLAEN +A        
Sbjct: 344 QFGKGICKETEIIDLSVNHKLISKAGAMFYYNEHSFRGKDALKNFLAENRSALEELEMKL 403

Query: 249 XXXXXNPETEKVPESD----------------SGEVLEEIATLDSTDEETAVVVEA 288
                N ETEK+ ESD                +  V E+IAT+DSTDEE A +VEA
Sbjct: 404 REKLLNAETEKMQESDVINGYVTEEIATVDSTNDNVTEKIATVDSTDEEAAAIVEA 459


>Glyma09g07400.1 
          Length = 439

 Score =  352 bits (903), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 182/275 (66%), Positives = 204/275 (74%), Gaps = 4/275 (1%)

Query: 9   HAGYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXX 68
             GYCAFVDAEHALD+TLAESIGV+T NLLLSQPDCGEQALSLVDTLIRSG         
Sbjct: 151 QGGYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDS 210

Query: 69  XXXXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGF 128
                PKGELDGEMGDAHMAMQARLMSQA               IFINQVRSKISTFGG+
Sbjct: 211 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVRSKISTFGGY 270

Query: 129 GGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAPPFKTAEFEL 188
           GGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEE +GSQV+VKVVKNK APPFKTA+FE+
Sbjct: 271 GGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETLGSQVLVKVVKNKHAPPFKTAQFEI 330

Query: 189 QFGKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAENP----TAXXXX 244
           +FGKGISR+AEII+LS+KYK+I K+GS + YN ++F G DALK FLAE+      A    
Sbjct: 331 EFGKGISREAEIIELSVKYKIIKKSGSFFEYNGRNFHGKDALKRFLAESDGVQELATKLR 390

Query: 245 XXXXXXXXXNPETEKVPESDSGEVLEEIATLDSTD 279
                        E+    D  E++EE+ +LDSTD
Sbjct: 391 EKILDAEPELEPEEQEMIGDVMELMEEMVSLDSTD 425


>Glyma15g18590.1 
          Length = 371

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/227 (74%), Positives = 188/227 (82%)

Query: 11  GYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXX 70
           GYCAFVDAEHALD+TLAESIGV+T NLLLSQPDCGEQALSLVDTLIRSG           
Sbjct: 87  GYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVA 146

Query: 71  XXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGFGG 130
              PKGELDGEMGDAHMAMQARLMSQA               +FINQVRSKISTFGG+GG
Sbjct: 147 ALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILVFINQVRSKISTFGGYGG 206

Query: 131 PTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAPPFKTAEFELQF 190
           PTEVTCGGNALKFYASVRLNIKRIGFVKKGEE +GSQV+VKVVKNK APPFKTA+FE++F
Sbjct: 207 PTEVTCGGNALKFYASVRLNIKRIGFVKKGEETLGSQVLVKVVKNKHAPPFKTAQFEIEF 266

Query: 191 GKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAEN 237
           GKGISR+AEII+LS+KYK+I K+GS + YN ++F G DALK FLAE+
Sbjct: 267 GKGISREAEIIELSVKYKIIKKSGSFFEYNGRNFHGKDALKRFLAES 313


>Glyma13g16490.1 
          Length = 369

 Score =  320 bits (821), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 172/275 (62%), Positives = 190/275 (69%), Gaps = 27/275 (9%)

Query: 11  GYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXX 70
           GYC FVDAEHALD+ LAESIGVNT NLLLSQPDCGEQALSLVDTLIRSG           
Sbjct: 122 GYCVFVDAEHALDKKLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVA 181

Query: 71  XXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGFGG 130
              PKGELDGEMG AHMAMQARLMSQA                    VRS ISTFGGF G
Sbjct: 182 ALVPKGELDGEMGHAHMAMQARLMSQALRKLSHCL------------VRSNISTFGGFSG 229

Query: 131 PTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAPPFKTAEFELQF 190
           PTE               L + RIGFVKKGEEI+GSQV+VKVVKNKL PPFK AEFELQF
Sbjct: 230 PTE---------------LLVVRIGFVKKGEEILGSQVLVKVVKNKLVPPFKIAEFELQF 274

Query: 191 GKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAENPTAXXXXXXXXXX 250
           GKGIS++ EII LS+K KLI+KAG+M+YYNEQSFRG DALK+FLAEN +A          
Sbjct: 275 GKGISKETEIIDLSVKNKLISKAGAMFYYNEQSFRGKDALKNFLAENQSALEELEMKLRE 334

Query: 251 XXXNPETEKVPESDSGEVLEEIATLDSTDEETAVV 285
              N ETEK+ +  +G+V E IAT+DSTDEE A +
Sbjct: 335 KLLNAETEKMWDVINGDVREAIATVDSTDEEAAAI 369


>Glyma19g31600.1 
          Length = 386

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 133/228 (58%), Gaps = 1/228 (0%)

Query: 11  GYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXX 70
           GYCA++D E+ALD +L ES+G++T NLL+S PDC E  LS+VDTL +SG           
Sbjct: 143 GYCAYLDVENALDFSLMESMGIDTENLLISHPDCAENLLSMVDTLTKSGAVDVIVIDSVA 202

Query: 71  XXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGFGG 130
              PK ELD      +  +Q+R+M+QA               +FINQ+R    +   +G 
Sbjct: 203 ALVPKCELDQLGVTTNRDLQSRMMTQALRKIHYSLSHSQTLIVFINQIRLSPKSAKEYGS 262

Query: 131 PTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIIGSQVVVKVVKNKLAP-PFKTAEFELQ 189
             EVTCGGNAL+FYA+VRL + R+  +K  +++ G  +  +VVKNKLAP   K AE  ++
Sbjct: 263 VEEVTCGGNALRFYAAVRLRLSRVRLIKTEDKVEGVMICAQVVKNKLAPAATKRAELGIK 322

Query: 190 FGKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSFRGGDALKDFLAEN 237
           FG+G   +++++ L+ ++ +  K    Y+    SF   +A + FLA+N
Sbjct: 323 FGRGFCHESDVLDLACEHGIFVKHEGSYFIEGNSFDSREAAELFLAQN 370


>Glyma15g27640.1 
          Length = 414

 Score =  162 bits (409), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 134/230 (58%), Gaps = 6/230 (2%)

Query: 11  GYCAFVDAEHALDRTLAESIGVNTNNLLLSQPDCGEQALSLVDTLIRSGXXXXXXXXXXX 70
           G    VDAEHA D   ++++GV+  NL++ QPD GE AL + D + RSG           
Sbjct: 145 GNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVS 204

Query: 71  XXXPKGELDGEMGDAHMAMQARLMSQAXXXXXXXXXXXXXXXIFINQVRSKISTFGGFGG 130
              P+ E++GE+G   + +QARLMSQA               IF+NQ+R KI  +  +G 
Sbjct: 205 ALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVY--YGN 262

Query: 131 PTEVTCGGNALKFYASVRLNIKRIGFVK--KGEEIIGSQVVVKVVKNKLAPPFKTAEFEL 188
           P EVT GG ALKF+AS+RL ++  G +K  KG+E IG +V ++V K+K++ P+K AEFE+
Sbjct: 263 P-EVTSGGIALKFFASLRLEVRPTGKIKSAKGDEEIGLKVRLRVQKSKVSRPYKIAEFEI 321

Query: 189 QFGKGISRKAEIIKLSLKYKLITKAGSMYYYNEQSF-RGGDALKDFLAEN 237
            FG+GIS+   I+  +    +++K GS Y Y +    +G D    +L EN
Sbjct: 322 IFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHRLGQGRDKAIQYLKEN 371