Miyakogusa Predicted Gene

Lj4g3v2141370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2141370.1 Non Chatacterized Hit- tr|K4DBX4|K4DBX4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,84.93,3e-19,seg,NULL; UPF0197,Uncharacterised protein family
UPF0197; UNCHARACTERIZED,Uncharacterised protein fa,CUFF.50381.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06260.1                                                       108   1e-24

>Glyma17g06260.1 
          Length = 76

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/56 (94%), Positives = 55/56 (98%)

Query: 1  MAPKPITSPVPDAWYPTLSVFTLAIGLVLTASFFIYEATSSRKTRSLAQELTTGAV 56
          MAPKPITSPVPD+WYPTLSVFTLAIGLVLTASFFIYEATSSRK+RSL QELTTGAV
Sbjct: 1  MAPKPITSPVPDSWYPTLSVFTLAIGLVLTASFFIYEATSSRKSRSLVQELTTGAV 56