Miyakogusa Predicted Gene

Lj4g3v2140280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140280.1 tr|B9I4Z4|B9I4Z4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_772304 PE=4
SV=1,50,0.000000000001,seg,NULL,CUFF.50365.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00250.1                                                        98   3e-21

>Glyma13g00250.1 
          Length = 294

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 77/141 (54%), Gaps = 9/141 (6%)

Query: 4   FTASELVPTTVFSTRRHFPGNAAIELHTTAAP--PPRRRNWVXXXXXXXXXXXXXXISTN 61
              SEL P   FS RRHFPG   ++LH  A P  P R R+WV              IS+N
Sbjct: 3   LGTSELNPPAFFSCRRHFPGIPTLQLHPPARPTSPRRCRDWVTYASRQKPPIP---ISSN 59

Query: 62  IDDNXXXXXXXXXXXXXXXX----XXXXVAAASDYQSPSTYSCEDIANYYSPLKNSRLRG 117
           ID+                          AAASDY +PSTY CEDI++YYS +K+ R RG
Sbjct: 60  IDERALCFDILWRWLSRLISFYLLSLNLAAAASDYPAPSTYPCEDISHYYSSVKHFRFRG 119

Query: 118 EAFKRKLNTIIAPHHSLSYQQ 138
           EA KR+LN+I+APHHSLSY++
Sbjct: 120 EALKRQLNSIVAPHHSLSYRE 140