Miyakogusa Predicted Gene

Lj4g3v2140190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140190.1 tr|G7JT76|G7JT76_MEDTR Lysine-specific
demethylase NO66 OS=Medicago truncatula GN=MTR_4g126780 PE=4
,75.24,0,SUBFAMILY NOT NAMED,NULL; MINA53 (MYC INDUCED NUCLEAR
ANTIGEN),Lysine-specific demethylase NO66/MYC-,CUFF.50388.1
         (772 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06400.1                                                       110   5e-24
Glyma13g00340.1                                                        92   2e-18
Glyma13g00330.1                                                        76   2e-13

>Glyma17g06400.1 
          Length = 182

 Score =  110 bits (276), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/137 (50%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 27  SDVNGIFALLLSSLSNLHQPHSLPFINKCLFKXXXXXXXXXXXXXXXXXXXXXXXXXTNS 86
           SD N IFALLL+SLSN   PHS+ FINKCLFK                           S
Sbjct: 48  SDANAIFALLLASLSN--TPHSVIFINKCLFKLRRSLLLSPTSLTPILALLPTLLRSKGS 105

Query: 87  QIARRVADIIGAASLASLDLNEEIASDCETVKGLISLLENPNRKVLFSACNAVXXXXXXX 146
            IA   ADIIGAASL S D NEEIASD ETV+GLISLL++ NRKVL SACNAV       
Sbjct: 106 DIACPAADIIGAASLVSFDANEEIASDSETVEGLISLLQSRNRKVLLSACNAVLDFSTTT 165

Query: 147 XXXXXXXXXXXXEKLMF 163
                        KLMF
Sbjct: 166 FAQRQLLKFSALNKLMF 182


>Glyma13g00340.1 
          Length = 171

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 66/113 (58%), Gaps = 2/113 (1%)

Query: 27  SDVNGIFALLLSSLSNLHQPHSLPFINKCLFKXXXXXXXXXXXXXXXXXXXXXXXXXTNS 86
           SD N  FALLL+SLSN   PHS+ FINKCLFK                         T  
Sbjct: 38  SDANATFALLLASLSN--TPHSVIFINKCLFKLRRFLLLSQTSMTPLLALLPTLLRSTRP 95

Query: 87  QIARRVADIIGAASLASLDLNEEIASDCETVKGLISLLENPNRKVLFSACNAV 139
           ++A R +DIIGAASL S D NEE A D ETV+GLISL ++  RKVL SACN V
Sbjct: 96  ELACRASDIIGAASLVSFDANEEFAFDSETVEGLISLFQSRIRKVLLSACNVV 148


>Glyma13g00330.1 
          Length = 105

 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 44/57 (77%)

Query: 220 VPRSLSEPVLCLFKEIRARVSDRVVDGDAEKSGEEGRLYKSNIGVSNLAESIFRLSI 276
           +P+SLSE  L + K+IR RVSD+ V   A K  EEGRLYKSNI VSNLAESIFRLSI
Sbjct: 49  IPQSLSEAFLRILKQIRVRVSDQEVIKGARKCNEEGRLYKSNIAVSNLAESIFRLSI 105