Miyakogusa Predicted Gene

Lj4g3v2140140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140140.1 tr|Q6YZF6|Q6YZF6_ORYSJ Os08g0535050 protein
OS=Oryza sativa subsp. japonica GN=P0702C09.24 PE=4
SV=1,52.21,4e-18,seg,NULL; coiled-coil,NULL; Use1,Vesicle transport
protein, Use1; SUBFAMILY NOT NAMED,NULL; FAMILY N,CUFF.50355.1
         (238 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03590.4                                                       361   e-100
Glyma14g03590.1                                                       361   e-100
Glyma14g03590.3                                                       352   2e-97
Glyma14g03590.2                                                       352   2e-97
Glyma13g00360.1                                                       350   1e-96
Glyma02g45160.1                                                       233   2e-61
Glyma17g06420.1                                                       145   4e-35
Glyma17g06420.2                                                       118   7e-27

>Glyma14g03590.4 
          Length = 240

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/240 (79%), Positives = 200/240 (83%), Gaps = 2/240 (0%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNL+RLL          KLVHYVATLREQLEQLAEE+T EGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLRRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTLEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVP-EESERNLVKENPSDIELKRQISLS-GLRRRPVPASSTE 118
           SEKIEAIA KLVN   D QVP ++ ERN VKE  S+IE K+QI LS GLRRRPVPASSTE
Sbjct: 61  SEKIEAIASKLVNHVIDTQVPGKDFERNFVKEKHSEIEEKKQILLSSGLRRRPVPASSTE 120

Query: 119 DRAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNT 178
           DRAHEPAETDH SP+KLD  AHAHI+KHRKLQEDLTDEMVVLAKQLKESSL MSQS+QNT
Sbjct: 121 DRAHEPAETDHTSPIKLDATAHAHIEKHRKLQEDLTDEMVVLAKQLKESSLTMSQSLQNT 180

Query: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWL            ILLIRVT
Sbjct: 181 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 240


>Glyma14g03590.1 
          Length = 240

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/240 (79%), Positives = 200/240 (83%), Gaps = 2/240 (0%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNL+RLL          KLVHYVATLREQLEQLAEE+T EGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLRRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTLEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVP-EESERNLVKENPSDIELKRQISLS-GLRRRPVPASSTE 118
           SEKIEAIA KLVN   D QVP ++ ERN VKE  S+IE K+QI LS GLRRRPVPASSTE
Sbjct: 61  SEKIEAIASKLVNHVIDTQVPGKDFERNFVKEKHSEIEEKKQILLSSGLRRRPVPASSTE 120

Query: 119 DRAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNT 178
           DRAHEPAETDH SP+KLD  AHAHI+KHRKLQEDLTDEMVVLAKQLKESSL MSQS+QNT
Sbjct: 121 DRAHEPAETDHTSPIKLDATAHAHIEKHRKLQEDLTDEMVVLAKQLKESSLTMSQSLQNT 180

Query: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWL            ILLIRVT
Sbjct: 181 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 240


>Glyma14g03590.3 
          Length = 238

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/240 (78%), Positives = 198/240 (82%), Gaps = 4/240 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNL+RLL          KLVHYVATLREQLEQLAEE+T EGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLRRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTLEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVP-EESERNLVKENPSDIELKRQISLS-GLRRRPVPASSTE 118
           SEKIEAIA KLVN   D QVP ++ ERN VKE  S+IE K+QI LS GLRRRP  ASSTE
Sbjct: 61  SEKIEAIASKLVNHVIDTQVPGKDFERNFVKEKHSEIEEKKQILLSSGLRRRP--ASSTE 118

Query: 119 DRAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNT 178
           DRAHEPAETDH SP+KLD  AHAHI+KHRKLQEDLTDEMVVLAKQLKESSL MSQS+QNT
Sbjct: 119 DRAHEPAETDHTSPIKLDATAHAHIEKHRKLQEDLTDEMVVLAKQLKESSLTMSQSLQNT 178

Query: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 238


>Glyma14g03590.2 
          Length = 238

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/240 (78%), Positives = 198/240 (82%), Gaps = 4/240 (1%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNL+RLL          KLVHYVATLREQLEQLAEE+T EGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLRRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTLEGLPRISKAMLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVP-EESERNLVKENPSDIELKRQISLS-GLRRRPVPASSTE 118
           SEKIEAIA KLVN   D QVP ++ ERN VKE  S+IE K+QI LS GLRRRP  ASSTE
Sbjct: 61  SEKIEAIASKLVNHVIDTQVPGKDFERNFVKEKHSEIEEKKQILLSSGLRRRP--ASSTE 118

Query: 119 DRAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNT 178
           DRAHEPAETDH SP+KLD  AHAHI+KHRKLQEDLTDEMVVLAKQLKESSL MSQS+QNT
Sbjct: 119 DRAHEPAETDHTSPIKLDATAHAHIEKHRKLQEDLTDEMVVLAKQLKESSLTMSQSLQNT 178

Query: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWL            ILLIRVT
Sbjct: 179 EKILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 238


>Glyma13g00360.1 
          Length = 232

 Score =  350 bits (897), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 184/239 (76%), Positives = 197/239 (82%), Gaps = 8/239 (3%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEE+ PEGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERAPEGLPRISKAVLNDY 60

Query: 61  SEKIEAIACKLVNSEPDIQVPEESERNLVKENPSDIELKRQISLS-GLRRRPVPASSTED 119
           SEKIEAIA KLVN         + ERN V+EN S+IE  +QI LS GLRRRPVPASSTE+
Sbjct: 61  SEKIEAIASKLVNHV-------DFERNSVEENSSEIEETKQILLSSGLRRRPVPASSTEE 113

Query: 120 RAHEPAETDHLSPVKLDTAAHAHIDKHRKLQEDLTDEMVVLAKQLKESSLMMSQSVQNTE 179
           RAH+PAETDH+SPVKLD AAHAHI+KHR LQ++LTDEMVVLAKQLKESSLMMSQS+QNTE
Sbjct: 114 RAHKPAETDHISPVKLDAAAHAHIEKHRMLQDNLTDEMVVLAKQLKESSLMMSQSLQNTE 173

Query: 180 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
           KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWL            ILLIRVT
Sbjct: 174 KILDSTEKAIEHSLASTGRANVRATAIYSESSKTSCLTWLVMFVMTCVFVMVILLIRVT 232


>Glyma02g45160.1 
          Length = 232

 Score =  233 bits (593), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 152/214 (71%), Gaps = 18/214 (8%)

Query: 33  LREQLEQLAEEKTPEGLPRISKAILNDYSEKIEAIACKLVNSEPDIQVPEESERNLVKEN 92
           LREQLEQLAEE+T EGLPRISKA+LNDYSEKIEAIA KLVN     +        L K +
Sbjct: 28  LREQLEQLAEERTLEGLPRISKAMLNDYSEKIEAIASKLVNHVTSCK--------LSKLS 79

Query: 93  PSDIELKRQI-----SLSGLRRRPVPASSTEDRAHEPAETDHLSPVKLDTAAHAHIDKHR 147
           PS I LK+ I         LRRRPVPASSTED+AHE AETDH SP+KLD  AHAHI+KHR
Sbjct: 80  PSGILLKKTILKLRKESRYLRRRPVPASSTEDKAHELAETDHTSPIKLDATAHAHIEKHR 139

Query: 148 KLQEDLTDEMVVLAKQLKESSLMMSQSVQNTEKILDSTEKAIEHSLASTG--RANVRAT- 204
           KLQEDLTDEMVVLAKQLKESSL MSQS+QNTEK  DS+  +  HS+   G  R+  RA+ 
Sbjct: 140 KLQEDLTDEMVVLAKQLKESSLTMSQSLQNTEK--DSSRISYFHSILLLGKHRSCQRASN 197

Query: 205 AIYSESSKTSCLTWLXXXXXXXXXXXXILLIRVT 238
             YS+SSKTSCLTWL            ILLIRVT
Sbjct: 198 GNYSDSSKTSCLTWLVMFVMTYVFVMVILLIRVT 231


>Glyma17g06420.1 
          Length = 114

 Score =  145 bits (365), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 90/115 (78%), Gaps = 4/115 (3%)

Query: 1   MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
           MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEE+TPEGLPRISKA+LNDY
Sbjct: 1   MGISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTPEGLPRISKAVLNDY 60

Query: 61  SEKIEAIACKLVN--SEPDIQVPEESERNLVKENPSDIELKRQISL-SGLRRRPV 112
           SEKIEAIA KLVN  S+P +   ++ ERN VKEN S+ E  +QI L SGLRRRPV
Sbjct: 61  SEKIEAIASKLVNRVSDPPV-TKKDFERNSVKENSSETEETKQILLSSGLRRRPV 114


>Glyma17g06420.2 
          Length = 97

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/73 (82%), Positives = 62/73 (84%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEE+TPEGLPRISKA+LNDY
Sbjct: 1  MGISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEERTPEGLPRISKAVLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEKIEAIA KLVN
Sbjct: 61 SEKIEAIASKLVN 73