Miyakogusa Predicted Gene
- Lj4g3v2139300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2139300.1 tr|G7JU96|G7JU96_MEDTR Mannosyl-oligosaccharide 1
2-alpha-mannosidase OS=Medicago truncatula
GN=MTR_,88.46,0,MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE,NULL;
MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-,CUFF.50327.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g23730.1 408 e-114
Glyma07g02290.1 406 e-113
Glyma17g06600.1 404 e-113
Glyma13g00470.1 321 5e-88
Glyma13g28910.1 190 1e-48
Glyma15g10130.1 187 1e-47
Glyma05g22300.1 168 6e-42
Glyma13g28910.2 103 2e-22
Glyma05g01830.1 85 1e-16
Glyma17g10060.1 82 8e-16
Glyma10g32320.1 79 4e-15
Glyma05g10160.1 77 3e-14
Glyma20g35290.1 52 6e-07
>Glyma08g23730.1
Length = 578
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/257 (75%), Positives = 218/257 (84%), Gaps = 5/257 (1%)
Query: 1 MGDSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLF 60
MGDSFYEYLLK W+QGNKT ++K YR+MWE SMKGL SLIR+STPSSF YI EK G L
Sbjct: 320 MGDSFYEYLLKVWIQGNKTSSIKHYRDMWEKSMKGLSSLIRRSTPSSFTYICEKNGGSLT 379
Query: 61 DKMDELACFVPGMLALGS-----SREGDKYMSLAEELAWTCYNFYQSTPTKLAGENYYFR 115
DKMDELACF PGM+ALGS + + K++SLAEELAWTCYNFYQSTPTKLAGENY+F
Sbjct: 380 DKMDELACFAPGMIALGSFGYSAADDSQKFLSLAEELAWTCYNFYQSTPTKLAGENYFFH 439
Query: 116 KDEDMTVGTSWNILRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKD 175
+DM+VGTSWNILRPET+ESLFYLWR TGNKTYQEWGWNIFQAFEKNSR E+GYVGLKD
Sbjct: 440 SGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRIESGYVGLKD 499
Query: 176 VTTGAKDNMMQSFFLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTRNAHEEESSV 235
V +G KDNMMQSFFLAETLKY YLLFSPSS+ISLDEWVFNTEAHPLRIVTR+ ++
Sbjct: 500 VNSGVKDNMMQSFFLAETLKYFYLLFSPSSVISLDEWVFNTEAHPLRIVTRHEEGLVKNL 559
Query: 236 DQEEKFPHHLHGRKEGR 252
++++K + GRKEGR
Sbjct: 560 NEKQKPFSRIGGRKEGR 576
>Glyma07g02290.1
Length = 560
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/257 (75%), Positives = 215/257 (83%), Gaps = 5/257 (1%)
Query: 1 MGDSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLF 60
MGDSFYEYLLK W+QGNKT VK YR+MWE SMKGL SLIR+STPSSF YI EK G L
Sbjct: 302 MGDSFYEYLLKVWIQGNKTSAVKHYRDMWEKSMKGLSSLIRRSTPSSFAYICEKNGGSLT 361
Query: 61 DKMDELACFVPGMLALGS-----SREGDKYMSLAEELAWTCYNFYQSTPTKLAGENYYFR 115
DKMDELACF PGM+ALGS + K++SLAEELAWTCYNFYQSTPTKLAGENY+F
Sbjct: 362 DKMDELACFAPGMIALGSFGYSADDDSQKFLSLAEELAWTCYNFYQSTPTKLAGENYFFH 421
Query: 116 KDEDMTVGTSWNILRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKD 175
+DM+VGTSWNILRPET+ESLFYLWR TGNKTYQEWGWNIFQAFEKNSR E+GYVGLKD
Sbjct: 422 SGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRIESGYVGLKD 481
Query: 176 VTTGAKDNMMQSFFLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTRNAHEEESSV 235
V +G KDNMMQSFFLAETLKY YLLFSPSS+I LDEWVFNTEAHPLRIVTR+ ++
Sbjct: 482 VNSGVKDNMMQSFFLAETLKYFYLLFSPSSVIPLDEWVFNTEAHPLRIVTRHEEGLVKNL 541
Query: 236 DQEEKFPHHLHGRKEGR 252
++++K + GRKEGR
Sbjct: 542 NEKQKPFSRIGGRKEGR 558
>Glyma17g06600.1
Length = 558
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/230 (82%), Positives = 207/230 (90%), Gaps = 4/230 (1%)
Query: 1 MGDSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLF 60
MGDSFYEYLLKAW+ GNKTE V FYREMWE SMKGL+S+IR+STPSSF Y+ E+LGN F
Sbjct: 314 MGDSFYEYLLKAWILGNKTEVVTFYREMWEKSMKGLQSMIRRSTPSSFTYLIERLGNADF 373
Query: 61 DKMDELACFVPGMLALGSSR----EGDKYMSLAEELAWTCYNFYQSTPTKLAGENYYFRK 116
DKMDELACFVPGMLALGSS E +K+++L EELAWTCYNFYQ TPTKLAGENYYFR
Sbjct: 374 DKMDELACFVPGMLALGSSNYGPGEAEKFLALGEELAWTCYNFYQLTPTKLAGENYYFRN 433
Query: 117 DEDMTVGTSWNILRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKDV 176
+DM+VGTSWNI RPETIESLFYLWRFTGNKTYQEWGWNIFQAFE NSR ETGYVGLKDV
Sbjct: 434 GQDMSVGTSWNIQRPETIESLFYLWRFTGNKTYQEWGWNIFQAFENNSRIETGYVGLKDV 493
Query: 177 TTGAKDNMMQSFFLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTR 226
TGAKDNMMQS+FL+ETLKYLYLLFSP S+ISL+EWVFNTEAHPLRI+TR
Sbjct: 494 NTGAKDNMMQSYFLSETLKYLYLLFSPPSVISLNEWVFNTEAHPLRIMTR 543
>Glyma13g00470.1
Length = 440
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/233 (70%), Positives = 182/233 (78%), Gaps = 13/233 (5%)
Query: 1 MGDSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLF 60
M DSFYEYLLKAW+ GNKTE V FYREMWE SMKGL+SLI + VY +
Sbjct: 215 MDDSFYEYLLKAWIHGNKTEVVTFYREMWEKSMKGLQSLIWRCYFEKEVYFS-------L 267
Query: 61 DKMDELACFVPGMLALGSSR----EGDKYMSLAEELAWTCYNFYQSTPTKLAGENYYFRK 116
+MDELACFVPGMLALGSS E +K+M+LAEELAWTCYNFYQ TPTKLAGE+YYF
Sbjct: 268 SRMDELACFVPGMLALGSSNYGLGEAEKFMALAEELAWTCYNFYQLTPTKLAGESYYFSN 327
Query: 117 DEDMTVGTSWNILR--PETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLK 174
+ LR PETIESLFYLW FTGNKTY+EWGWNIFQAFE SR ETGYVGLK
Sbjct: 328 GQSNPPRCYVLRLRKLPETIESLFYLWCFTGNKTYREWGWNIFQAFENKSRIETGYVGLK 387
Query: 175 DVTTGAKDNMMQSFFLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTRN 227
DV TGAKDNMMQS+FL+ETLKYLYLLFSP S+ISL+EWVFNTEAH LRI+TR+
Sbjct: 388 DVNTGAKDNMMQSYFLSETLKYLYLLFSPPSVISLNEWVFNTEAHILRIMTRS 440
>Glyma13g28910.1
Length = 634
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 154/265 (58%), Gaps = 43/265 (16%)
Query: 2 GDSFYEYLLKAWVQGNKTETVK--FYREMWETSMKGLESL-IRKSTPSSFVYITE---KL 55
GDS+YEYL+K W+Q + F EM++ +M G+ L +RKS P+ V++ E
Sbjct: 366 GDSYYEYLIKVWLQSGASSNTNTSFLYEMYKEAMNGVRHLLVRKSIPNGLVFVGELPYGS 425
Query: 56 GNGLFDKMDELACFVPGMLALGSSR---------------EGDKYMSLAEELAWTCYNFY 100
+G KMD L CF+PG LA+G+++ E + + LAE+L TC+ Y
Sbjct: 426 NSGFSPKMDHLVCFLPGTLAIGATKGLTKKQAMENNMLNFEDLENLKLAEDLTKTCFEMY 485
Query: 101 QSTPTKLAGENYYFRKDE-----------------DMTVGTS--WNILRPETIESLFYLW 141
T T LA E YF +E D+ + + N+LRPET+ESLF L+
Sbjct: 486 AVTSTGLAPEIAYFHTEEFSEEGHDGGNKSSEFVNDIIIKPADRHNLLRPETVESLFVLY 545
Query: 142 RFTGNKTYQEWGWNIFQAFEKNSRTET-GYVGLKDVTTGA--KDNMMQSFFLAETLKYLY 198
R T + Y+EWGW IF+AFE +++ +T GY L DVT+ + + M++FFL ETLKY Y
Sbjct: 546 RITEDPKYREWGWQIFEAFENHTKVDTGGYCSLDDVTSVPPHRRDKMETFFLGETLKYFY 605
Query: 199 LLFSPSSLISLDEWVFNTEAHPLRI 223
LLF+ SSLI LD++VFNTEAHP+ I
Sbjct: 606 LLFADSSLIPLDKFVFNTEAHPIPI 630
>Glyma15g10130.1
Length = 633
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 152/265 (57%), Gaps = 43/265 (16%)
Query: 2 GDSFYEYLLKAWVQ--GNKTETVKFYREMWETSMKGLESL-IRKSTPSSFVYITE---KL 55
GDS+YEYL+K W+Q + + EM+ +M G+ L +RKS P+ V++ E
Sbjct: 365 GDSYYEYLIKVWLQSGASSNSNTSYLYEMYNEAMNGVRHLLVRKSIPNGLVFVGELPYGS 424
Query: 56 GNGLFDKMDELACFVPGMLALGSSR---------------EGDKYMSLAEELAWTCYNFY 100
+ KMD L CF+PG LA+G+++ E + + LAE+L TC+ Y
Sbjct: 425 NSNFSPKMDHLVCFLPGTLAIGATKGLTKKQAMKNNMLNFEDLENLKLAEDLTKTCFEMY 484
Query: 101 QSTPTKLAGENYYFRKDE-----------------DMTVGTS--WNILRPETIESLFYLW 141
T T LA E YF +E D+ + + N+LRPET+ESLF L+
Sbjct: 485 AVTSTGLAPEIAYFHTEEFSEQGHDGGNKSSEFVNDIIIKPADRHNLLRPETVESLFVLY 544
Query: 142 RFTGNKTYQEWGWNIFQAFEKNSRTET-GYVGLKDVTTGA--KDNMMQSFFLAETLKYLY 198
R T + Y+EWGW IF+AFEK+++ +T GY L DVT + + M++FFL ETLKY Y
Sbjct: 545 RITEDPKYREWGWQIFEAFEKHTKVDTGGYCSLDDVTIVPPHRRDKMETFFLGETLKYFY 604
Query: 199 LLFSPSSLISLDEWVFNTEAHPLRI 223
LLF+ SSLI LD++VFNTEAHP+ I
Sbjct: 605 LLFADSSLIPLDKFVFNTEAHPIPI 629
>Glyma05g22300.1
Length = 203
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 91 ELAWTCYNFYQSTPTKLAGENYYFRKDEDMTVGTSWNILRPETIESLFYLWRFTGNKTYQ 150
+LAWTCYNFYQ TPTKLAGENYYFR DM+VGTSWNI RPETIESLFYLWRFTGNKTYQ
Sbjct: 64 KLAWTCYNFYQLTPTKLAGENYYFRNGHDMSVGTSWNIQRPETIESLFYLWRFTGNKTYQ 123
Query: 151 EWGWNIFQAFEKNSRTETGYVGLKD 175
EWGWNIFQAFE NSR ETGYVGLKD
Sbjct: 124 EWGWNIFQAFENNSRIETGYVGLKD 148
>Glyma13g28910.2
Length = 610
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 40/188 (21%)
Query: 2 GDSFYEYLLKAWVQGNKTETVK--FYREMWETSMKGLESL-IRKSTPSSFVYITE---KL 55
GDS+YEYL+K W+Q + F EM++ +M G+ L +RKS P+ V++ E
Sbjct: 366 GDSYYEYLIKVWLQSGASSNTNTSFLYEMYKEAMNGVRHLLVRKSIPNGLVFVGELPYGS 425
Query: 56 GNGLFDKMDELACFVPGMLALGSSR---------------EGDKYMSLAEELAWTCYNFY 100
+G KMD L CF+PG LA+G+++ E + + LAE+L TC+ Y
Sbjct: 426 NSGFSPKMDHLVCFLPGTLAIGATKGLTKKQAMENNMLNFEDLENLKLAEDLTKTCFEMY 485
Query: 101 QSTPTKLAGENYYFRKDE-----------------DMTVGTS--WNILRPETIESLFYLW 141
T T LA E YF +E D+ + + N+LRPET+ESLF L+
Sbjct: 486 AVTSTGLAPEIAYFHTEEFSEEGHDGGNKSSEFVNDIIIKPADRHNLLRPETVESLFVLY 545
Query: 142 RFTGNKTY 149
R T + Y
Sbjct: 546 RITEDPKY 553
>Glyma05g01830.1
Length = 571
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 3 DSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLFDK 62
DSFYEYLLKA + K + + +M+ ++ ++ R + + G + +
Sbjct: 274 DSFYEYLLKAHILFGKED----FWKMFHSAYVAVQKYFRHG--PWYHEADMRTGRATYWQ 327
Query: 63 MDELACFVPGMLALGSSREGDKYMSLAEELAW-TCYNFYQSTPTKLAGENYYFRKDEDMT 121
+ L F PG+ L GD + + + + Y P + Y + +
Sbjct: 328 LTSLQAFWPGLQVL----IGDVIAANSSHREFFHVWKRYGVLPER------YLLDHQMLH 377
Query: 122 VGTSWNILRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKDVTTGAK 181
+ LRPE ES FYL++ T + Y E G +I + ++ E G+ +KDVTT
Sbjct: 378 PTEKYYPLRPELAESTFYLYQATKDPWYIEVGESIVNSLNLYTKVEGGFASIKDVTTMQL 437
Query: 182 DNMMQSFFLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTRNAHEE 231
++ SFFLAET KYLYLLF S + + +VF TE HPL +++ HEE
Sbjct: 438 EDHQHSFFLAETCKYLYLLFD-DSFVHENNYVFTTEGHPLPVLS-TWHEE 485
>Glyma17g10060.1
Length = 581
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 129 LRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKDVTTGAKDNMMQSF 188
LRPE ES FYL++ T + Y E G +I + ++ E G+ +KDVTT ++ SF
Sbjct: 395 LRPELAESTFYLYQATKDPWYIEVGESIVNSLNLYTKVEGGFASIKDVTTMQLEDHQHSF 454
Query: 189 FLAETLKYLYLLFSPSSLISLDEWVFNTEAHPLRIVTRNAHEE 231
FLAET KYLYLLF S + + +VF TE HPL +++ HEE
Sbjct: 455 FLAETCKYLYLLFD-DSFVHENNYVFTTEGHPLPVLS-TWHEE 495
>Glyma10g32320.1
Length = 619
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 3 DSFYEYLLKAWVQGNKTETVKFYREMWETSMKGLESLIRKSTPSSFVYITEKLGNGLFDK 62
DSFYEYLLKA++ E + ++E + +M L +V + ++
Sbjct: 259 DSFYEYLLKAYLLFGDEEYLYIFQEAYAAAMHYLYH------DPWYVEVNMDSAAIVWPL 312
Query: 63 MDELACFVPGMLALGSS-----REGDKYMSLAEELAWTCYNFYQSTPTKLAGENYYFRKD 117
+ L F PG+ L R ++S+ +T F ++ + G+ Y
Sbjct: 313 FNSLQAFWPGLQVLAGDINPAIRTHAAFLSVWRRYGFTPEGFNLASLSVQHGQKSY---- 368
Query: 118 EDMTVGTSWNILRPETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKDVT 177
LRPE IES ++L++ T + Y + G ++ + + +R GY + DV
Sbjct: 369 ----------PLRPELIESTYWLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVE 418
Query: 178 TGAKDNMMQSFFLAETLKYLYLLF----SPSSLISLD--EWVFNTEAHPL 221
+++ M+SFFLAET+KYL+LLF P +L+ +++F+TE H L
Sbjct: 419 NHQQEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLL 468
>Glyma05g10160.1
Length = 45
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 37/44 (84%)
Query: 132 ETIESLFYLWRFTGNKTYQEWGWNIFQAFEKNSRTETGYVGLKD 175
ET ESLFYLW FT NKTYQEWGWNIFQAFE NS ET YVGLKD
Sbjct: 2 ETFESLFYLWCFTRNKTYQEWGWNIFQAFENNSWIETRYVGLKD 45
>Glyma20g35290.1
Length = 378
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 149 YQEWGWNIFQAFEKNSRTETGYVGLKDVTTGAKDNMMQSFFLAETLKYLYLLFSPSSLIS 208
Y + G ++ + + +R GY + DV +N M+SFFLAET+KYL+LLF +
Sbjct: 170 YLDAGRDMIASLQYGTRCPCGYYHISDV-----ENHMESFFLAETVKYLWLLFDLWKMGH 224
Query: 209 LDEWVFNTEAHPL 221
E++F+TE H L
Sbjct: 225 TSEYIFSTEGHLL 237