Miyakogusa Predicted Gene

Lj4g3v2137130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2137130.1 Non Chatacterized Hit- tr|I3S755|I3S755_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,54.69,0.00000000002,seg,NULL,CUFF.50319.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g04040.2                                                        49   9e-07
Glyma16g04040.1                                                        49   9e-07
Glyma19g29460.1                                                        49   1e-06
Glyma19g29460.2                                                        48   2e-06

>Glyma16g04040.2 
          Length = 236

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  NCKPLIIIQIPGKKGMHPSTRQISLLSSXXXXXXXXXXXXKPLVGVMNFLLTMEPYVTYG 108
           N   LIII+I GKK MHP TR++  L S            KP  G+M  L  +EPYVTYG
Sbjct: 74  NSNTLIIIRIQGKKDMHPRTRKV--LYSLGLRRRFSAVFVKPSEGIMAKLQRVEPYVTYG 131


>Glyma16g04040.1 
          Length = 236

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  NCKPLIIIQIPGKKGMHPSTRQISLLSSXXXXXXXXXXXXKPLVGVMNFLLTMEPYVTYG 108
           N   LIII+I GKK MHP TR++  L S            KP  G+M  L  +EPYVTYG
Sbjct: 74  NSNTLIIIRIQGKKDMHPRTRKV--LYSLGLRRRFSAVFVKPSEGIMAKLQRVEPYVTYG 131


>Glyma19g29460.1 
          Length = 236

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  NCKPLIIIQIPGKKGMHPSTRQISLLSSXXXXXXXXXXXXKPLVGVMNFLLTMEPYVTYG 108
           N   +III+I GKK MHP TR++  L S            KP  G+M  L  +EPYVTYG
Sbjct: 74  NSNTMIIIRIQGKKDMHPRTRKV--LYSLGLRRRFSAVFVKPSEGIMAKLQRVEPYVTYG 131


>Glyma19g29460.2 
          Length = 175

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  NCKPLIIIQIPGKKGMHPSTRQISLLSSXXXXXXXXXXXXKPLVGVMNFLLTMEPYVTYG 108
           N   +III+I GKK MHP TR++  L S            KP  G+M  L  +EPYVTYG
Sbjct: 13  NSNTMIIIRIQGKKDMHPRTRKV--LYSLGLRRRFSAVFVKPSEGIMAKLQRVEPYVTYG 70