Miyakogusa Predicted Gene

Lj4g3v2121810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2121810.1 tr|Q66KP7|Q66KP7_XENLA MGC85550 protein
OS=Xenopus laevis GN=rps28p9 PE=4 SV=1,77.05,2e-19,no
description,Nucleic acid-binding, OB-fold; seg,NULL;
RIBOSOMAL_S28E,Ribosomal protein S28e; 40S R,93501_g.1
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g37600.1                                                       103   3e-23
Glyma03g36420.1                                                       103   5e-23
Glyma19g39250.2                                                       103   5e-23
Glyma19g39250.1                                                       103   5e-23
Glyma19g39070.1                                                       103   5e-23
Glyma03g36580.1                                                       103   5e-23

>Glyma13g37600.1 
          Length = 95

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 31 MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 81


>Glyma03g36420.1 
          Length = 66

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 2  MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 52


>Glyma19g39250.2 
          Length = 65

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 1  MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51


>Glyma19g39250.1 
          Length = 65

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 1  MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51


>Glyma19g39070.1 
          Length = 65

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 1  MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51


>Glyma03g36580.1 
          Length = 65

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/51 (96%), Positives = 51/51 (100%)

Query: 1  MESQVKHAIVVKIMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51
          MESQVKHA+VVK+MGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI
Sbjct: 1  MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51