Miyakogusa Predicted Gene

Lj4g3v2120520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120520.1 Non Chatacterized Hit- tr|J3MH55|J3MH55_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G3,61.18,0.00000000000009,seg,NULL; DUF1517,Protein of unknown
function DUF1517,CUFF.50273.1
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00820.1                                                       139   1e-33
Glyma17g06910.1                                                       132   2e-31

>Glyma13g00820.1 
          Length = 189

 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/183 (48%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 9   SIASSHQSFXXXXXXXXXXS-NFRTLHPSSTSLKTIYCXXXXXXXXXXX-XXNENKXXXX 66
           SIASSHQSF          +  FRT     +SLKT+ C              NENK    
Sbjct: 3   SIASSHQSFLTNALIPLTHNPKFRTTVTFPSSLKTVSCSSPQHEQQQSPRKKNENKLAKL 62

Query: 67  XXXXXXXXXXXXGSVHDASAAKSGGRIGGQSFKSSAPRSAPRINNKSRTNIYVNPRVAPP 126
                       GSVHDASAAK+GGRIGGQ+FKS+APRS+PRINN SRTNIY+NPRVAPP
Sbjct: 63  AIVALAAGVLTLGSVHDASAAKTGGRIGGQAFKSAAPRSSPRINN-SRTNIYINPRVAPP 121

Query: 127 LXXXXXXXXXXXXXXXXXXXXFSFFXXXXXXXXXXXXXFDTIVLFMLLGAGAAVVRRFFR 186
           L                    FSFF             FDTI+LFM LGA AAVVRRFF 
Sbjct: 122 LVGGYGYGYGVPFYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGAAAAVVRRFFG 181

Query: 187 SKN 189
           S+N
Sbjct: 182 SRN 184


>Glyma17g06910.1 
          Length = 176

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 98/189 (51%), Gaps = 18/189 (9%)

Query: 1   MCNTGVGISIASSHQSFXXXXXXXXXXSNFRTLHPSSTSLKTIYCXXXXXXXXXXXXXNE 60
           MC+T   ISIASSHQSF            FRT     T +  + C             NE
Sbjct: 1   MCSTS--ISIASSHQSFLTNALIP---PKFRT-----TRISIVSCSSPQQSPRKKN--NE 48

Query: 61  NKXXXXXXXXXXXXXXXXGSVHDASAAKSGGRIGGQSFKSSAPRSAPRINNKSRTNIYVN 120
           NK                GSVHDASAAK+GGRIGGQ+FKS+APRSAPRINN SRTNIY+N
Sbjct: 49  NKLAKLAMVAVAVGVLTLGSVHDASAAKTGGRIGGQAFKSAAPRSAPRINN-SRTNIYIN 107

Query: 121 PRVAPPLXXXXXXXXXXXXXXXXXXXXFSFFXXXXXXXXXXXXXFDTIVLFMLLGAGAAV 180
           PRVAPPL                    FSFF             FDTI+LFM LG  AAV
Sbjct: 108 PRVAPPL-----VGGYGYGYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGVAAAV 162

Query: 181 VRRFFRSKN 189
           VRRFF S+N
Sbjct: 163 VRRFFGSRN 171