Miyakogusa Predicted Gene

Lj4g3v2120410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120410.1 tr|G7JUE1|G7JUE1_MEDTR WD repeat-containing
protein OS=Medicago truncatula GN=MTR_4g127820 PE=4
SV=1,74.41,0,seg,NULL; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; TRANSDUCIN
FAMI,CUFF.50264.1
         (801 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00880.1                                                      1114   0.0  
Glyma17g06970.1                                                      1071   0.0  
Glyma11g07860.1                                                       136   9e-32
Glyma08g08960.1                                                       111   3e-24

>Glyma13g00880.1 
          Length = 802

 Score = 1114 bits (2881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/805 (69%), Positives = 638/805 (79%), Gaps = 8/805 (0%)

Query: 1   MKGGQTYVSSPPSFSNDGKRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPAPN 60
           ++GG+ YVSS P+FSNDGKRLLVCSG +V++FSTAT   VS+LEGHTAAVT++VV+P+ +
Sbjct: 2   IRGGENYVSSAPAFSNDGKRLLVCSGSTVSIFSTATGSLVSSLEGHTAAVTAVVVIPS-S 60

Query: 61  SVLSYCWTSSLDGTIRYWDFFLSECIKTLDLGFPIYSMVIPAILSPPEENNARQPNVFAY 120
           + LSYCWT+S+DGTIR+WDF + EC+K +DL  PI+SMV+P+ILSP EEN  +  N  AY
Sbjct: 61  TGLSYCWTASVDGTIRHWDFSVPECVKIIDLCLPIFSMVVPSILSPREENGKKTANAIAY 120

Query: 121 VSVQDENAQDNRPKPRRGQIRKCNLTNYHAISNHILKETERPESLTICPSGKFLGIKDKR 180
           VSVQ  NA DNRPKP  GQIRKCNLT++ ++S  ILKETERPESLTI   G FLGIKDKR
Sbjct: 121 VSVQVINAPDNRPKPLYGQIRKCNLTHFRSVSQLILKETERPESLTISHLGNFLGIKDKR 180

Query: 181 KLHIWKIPKMDSDSAVLKKITLHHTKTFTALAFHPTERIVAAGDVTGRILIWRGFGTHKF 240
           KLHIW +PK DSDSAV KKITLHHTKTFT LAFHPTER VAAGDVTGRILIW  FG  KF
Sbjct: 181 KLHIWAVPKKDSDSAVSKKITLHHTKTFTVLAFHPTERTVAAGDVTGRILIWHEFGAQKF 240

Query: 241 QDNSGLLNTRSMNDEEDKPGVRDNDDAESCSTWHWHSAGVRHLSFSSDGAYLYSGGKEGV 300
            ++SGL+N RSM D+E+K GVR NDDAES  T HWHS+GVR LSFSSDGAYLYSGGKEGV
Sbjct: 241 LNSSGLVNGRSM-DQENKDGVRQNDDAESSVTRHWHSSGVRCLSFSSDGAYLYSGGKEGV 299

Query: 301 LVLWQLDTGKKTFLPRIGSPLLYFVDSTDPSLSSISCADNQIHILKTPS--MEIMRSISG 358
           LV+W+LDT K  FLPR GSPLLYFV+S D SL SIS ADNQ+ ILK PS  MEI+  ISG
Sbjct: 300 LVIWRLDTKKNYFLPRFGSPLLYFVESPDRSLFSISHADNQVLILKKPSKPMEIISCISG 359

Query: 359 IKXXXXXXXXXXXXXXRAAFDCSSGLVAVQTENYGIQFYSLFGDRGLYEVQVCERNHQXX 418
           IK              R AFDC+SGL+AVQTENY IQFYSLF +R +YEVQVCERNHQ  
Sbjct: 360 IKPPLPSQDICEGLSSRVAFDCTSGLLAVQTENYAIQFYSLFANREVYEVQVCERNHQPV 419

Query: 419 XXXXXXXXXXXXXXXXXIMCTVEVKLPEEGIGGLICLKFWDLDSDSKRFSVSTLIYEPHR 478
                            +M TV+VKLPE+GIGG ICLKFWDLD D+KRFS+STLIYEPHR
Sbjct: 420 DEVTVVVSLVELSVDGSMMGTVDVKLPEDGIGGFICLKFWDLD-DNKRFSLSTLIYEPHR 478

Query: 479 DAHISSVAFHPTCHMAVSSSYGGDFKIWVCKEESQQKGKMLQTSSWMCHAVGSYKNKAMR 538
           DAHIS+VAFHPT  MAVS+SYGGDFKIWVC+EE QQKG+M+++S W CHAVGSYKNKAMR
Sbjct: 479 DAHISAVAFHPTRPMAVSTSYGGDFKIWVCREEIQQKGQMVRSSGWRCHAVGSYKNKAMR 538

Query: 539 AAAFSADGSVLAVAADTVITLWDPDKNVLIAVVGETPTPIDRLNFAGKSEYLLSVSHGSN 598
           AAAFSADGSVLAVAADTVITLWDP+ NVLIAV+GET  PI RL FAGKS+YLLSV HGS 
Sbjct: 539 AAAFSADGSVLAVAADTVITLWDPNNNVLIAVIGETQMPIMRLVFAGKSDYLLSVCHGSK 598

Query: 599 PQXXXXXXXXXXXXXXXXXQVEAVSCSMDLSFFAVLALLPKSNERTFRSDGIILLFNATD 658
           PQ                 Q+EAVS ++DLS+FAVLALLP+SNE TF+ DGIILLFN TD
Sbjct: 599 PQLSVWSMSKLVASWSYRLQIEAVSSAIDLSYFAVLALLPESNEYTFKGDGIILLFNVTD 658

Query: 659 PIPVASWSVAKAKGGGLAFIKGNSSELAITDGKPLQTLLAYINGDREYVLFDPNDKESCE 718
           P+PVASWSV KAKGG LAF+KG+ SE A+ DGKP QTLLAYINGD EY +F P+  ++CE
Sbjct: 659 PVPVASWSVTKAKGGRLAFLKGDPSEQAVIDGKPTQTLLAYINGDHEYAIFHPSGGKACE 718

Query: 719 RSMNRQEDLAAFEETGQIGYTSIYGELPAFDFKR--NKASSVFSGASERPWETIFSGSSH 776
            SM +QEDL  FEETGQ GYTSIYGELP FD KR  + + S  + +S+RPW TIFSG S 
Sbjct: 719 LSMTKQEDL-VFEETGQFGYTSIYGELPKFDLKRKMDSSISSAASSSKRPWVTIFSGLSQ 777

Query: 777 MLPPLTKLCSEFLESLLEKRTTTVE 801
            LPPLTKLCSEFLESLLEKRT TVE
Sbjct: 778 SLPPLTKLCSEFLESLLEKRTATVE 802


>Glyma17g06970.1 
          Length = 802

 Score = 1071 bits (2771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/806 (68%), Positives = 628/806 (77%), Gaps = 10/806 (1%)

Query: 1   MKGGQTYVSSPPSFSNDGKRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPAPN 60
           ++GGQ YVSS P+FSNDGKRLLVCSG +V++FST T   VS+LEGHTA+VT++VVVP+  
Sbjct: 2   IRGGQNYVSSAPAFSNDGKRLLVCSGSTVSIFSTGTGSLVSSLEGHTASVTAVVVVPSST 61

Query: 61  SVLSYCWTSSLDGTIRYWDFFLSECIKTLDLGFPIYSMVIPAILSPPEENNARQPNVFAY 120
             LSYCWT+S+DGTIR+WDF + EC+  +DL  PI+SMV+P+ILSP EEN    PNV AY
Sbjct: 62  G-LSYCWTASVDGTIRHWDFSVPECVNIIDLCLPIFSMVVPSILSPREENGKTPPNVIAY 120

Query: 121 VSVQDENAQ-DNRPKPRRGQIRKCNLTNYHAISNHILKETERPESLTICPSGKFLGIKDK 179
           VSVQ   A  DN  KP  GQIRKCNLT++ ++SN I+KETERPESLTI PSG FLGIKDK
Sbjct: 121 VSVQGIKAPPDNPTKPLYGQIRKCNLTHFRSVSNLIMKETERPESLTISPSGNFLGIKDK 180

Query: 180 RKLHIWKIPKMDSDSAVLKKITLHHTKTFTALAFHPTERIVAAGDVTGRILIWRGFGTHK 239
           RKLHIW +PK DSDSAV KKI LHHTKT T LAFHPTER VAAGDVTGRILIW  FG  K
Sbjct: 181 RKLHIWAVPKKDSDSAVSKKIILHHTKTLTVLAFHPTERTVAAGDVTGRILIWHEFGAQK 240

Query: 240 FQDNSGLLNTRSMNDEEDKPGVRDNDDAESCSTWHWHSAGVRHLSFSSDGAYLYSGGKEG 299
           F  +SGL+N RS  D+E+K GVR NDDAES  T HWHS+GV  LSFSSDGA+LYSGGKEG
Sbjct: 241 FLSSSGLINGRS-TDQENKDGVRQNDDAESSVTRHWHSSGVSCLSFSSDGAFLYSGGKEG 299

Query: 300 VLVLWQLDTGKKTFLPRIGSPLLYFVDSTDPSLSSISCADNQIHILKTPS--MEIMRSIS 357
           VLV+W+LDT K   LPR GSPLLYFVDS D SL SI C DNQ+ ILK PS  MEI+  IS
Sbjct: 300 VLVIWRLDTKKNYCLPRFGSPLLYFVDSPDRSLFSI-CLDNQMLILKKPSKPMEIISCIS 358

Query: 358 GIKXXXXXXXXXXXXXXRAAFDCSSGLVAVQTENYGIQFYSLFGDRGLYEVQVCERNHQX 417
           GIK              R AFDC+SGL+AVQTENY IQFYSLF +R +YEVQVCERNHQ 
Sbjct: 359 GIKPPLSSQDICEGLSSRVAFDCTSGLLAVQTENYAIQFYSLFANREVYEVQVCERNHQP 418

Query: 418 XXXXXXXXXXXXXXXXXXIMCTVEVKLPEEGIGGLICLKFWDLDSDSKRFSVSTLIYEPH 477
                             +M TV+VKLPE+GIGG ICLKFWDLD D+KRFS+STLIYEPH
Sbjct: 419 VDEVTVVVSLVELSVDGSMMGTVDVKLPEDGIGGFICLKFWDLD-DNKRFSLSTLIYEPH 477

Query: 478 RDAHISSVAFHPTCHMAVSSSYGGDFKIWVCKEESQQKGKMLQTSSWMCHAVGSYKNKAM 537
           RDAHIS+VAFHPT  MAVS+SYGGDFKIWVCKEE QQ G+M++ S W CHAVGSYKNKAM
Sbjct: 478 RDAHISAVAFHPTRPMAVSTSYGGDFKIWVCKEEIQQNGQMVRNSGWKCHAVGSYKNKAM 537

Query: 538 RAAAFSADGSVLAVAADTVITLWDPDKNVLIAVVGETPTPIDRLNFAGKSEYLLSVSHGS 597
           RAAAFSADGSVLAVAADTVITLWDP+ NVLIAV+GETP PI RL FAGKS+YLLSV HGS
Sbjct: 538 RAAAFSADGSVLAVAADTVITLWDPNNNVLIAVIGETPMPITRLVFAGKSDYLLSVCHGS 597

Query: 598 NPQXXXXXXXXXXXXXXXXXQVEAVSCSMDLSFFAVLALLPKSNERTFRSDGIILLFNAT 657
            PQ                 Q+EAVS ++DLS+FAVLALLPKSNE TF+ DGIILLF  T
Sbjct: 598 KPQLSVWSMSKLAASWSYRLQIEAVSSAIDLSYFAVLALLPKSNECTFKGDGIILLFKVT 657

Query: 658 DPIPVASWSVAKAKGGGLAFIKGNSSELAITDGKPLQTLLAYINGDREYVLFDPNDKESC 717
           DP+PVASWSV KAKGG LAFI+G+  E A+ DGKP QTLLAYINGD EYV+F P+ +++C
Sbjct: 658 DPVPVASWSVTKAKGGRLAFIQGDPFERAVIDGKPTQTLLAYINGDHEYVIFHPSGRKAC 717

Query: 718 ERSMNRQEDLAAFEETGQIGYTSIYGELPAFDFKR--NKASSVFSGASERPWETIFSGSS 775
           E SM +Q+DL AFEETGQ GY SIYGELP FD KR  + + S  + AS+RPWETIFSG S
Sbjct: 718 ELSMTKQDDL-AFEETGQFGYASIYGELPKFDLKRKMDSSISSAASASKRPWETIFSGLS 776

Query: 776 HMLPPLTKLCSEFLESLLEKRTTTVE 801
             LPPLTKLCSEFLESLLEKRT TVE
Sbjct: 777 QSLPPLTKLCSEFLESLLEKRTATVE 802


>Glyma11g07860.1 
          Length = 195

 Score =  136 bits (343), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 86/127 (67%), Gaps = 19/127 (14%)

Query: 19  KRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPAPNSVLSYCWTSSLDGTIRYW 78
           KRLLVCSG +V++FSTAT   VS+LEGHTA    +VVVP+    LSYCWT+S+DGTI +W
Sbjct: 20  KRLLVCSGSTVSIFSTATGSLVSSLEGHTA----VVVVPSSTG-LSYCWTASVDGTICHW 74

Query: 79  DFFLSECIKTLDLGFPIYSMVIPAILSPPEENNARQPNVFAYVSVQDENAQDNRPKPRRG 138
           DF + EC+K +DL  PI+SM              +  NV AYVSVQD NA DN PKP  G
Sbjct: 75  DFSVPECVKIIDLCLPIFSM--------------KTANVIAYVSVQDINAPDNHPKPLYG 120

Query: 139 QIRKCNL 145
           QIRKCN 
Sbjct: 121 QIRKCNF 127


>Glyma08g08960.1 
          Length = 181

 Score =  111 bits (277), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/129 (48%), Positives = 76/129 (58%), Gaps = 12/129 (9%)

Query: 16  NDGKRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPAPNSVLSYCWTSSLDGTI 75
           ND +RLLVCSG +V V           L+ H      +   P          T+ +D TI
Sbjct: 1   NDTQRLLVCSGSTVHVH----------LQHHHRLPRFLARRPHRRRHCRP--TAFVDETI 48

Query: 76  RYWDFFLSECIKTLDLGFPIYSMVIPAILSPPEENNARQPNVFAYVSVQDENAQDNRPKP 135
           R+WDF + EC+K +DL  PI+SMV+P+ILSP EEN  +  NV  YVSVQD NA DNRPKP
Sbjct: 49  RHWDFSVPECVKIIDLCLPIFSMVVPSILSPREENEKKTMNVIPYVSVQDINALDNRPKP 108

Query: 136 RRGQIRKCN 144
             GQIRK N
Sbjct: 109 FYGQIRKFN 117