Miyakogusa Predicted Gene

Lj4g3v2120380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120380.1 tr|F2CQT6|F2CQT6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,81.82,1e-18,seg,NULL;
DUF1777,Domain of unknown function DUF1777,CUFF.50255.1
         (184 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00900.1                                                       175   3e-44
Glyma17g06990.1                                                       174   6e-44
Glyma08g23040.1                                                        79   2e-15

>Glyma13g00900.1 
          Length = 184

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 96/116 (82%)

Query: 68  TPSPDQPRKRHRRDSVEDDHKDTKKVVSDFVDGIVKEQQQKHKXXXXXXXXXXXXXXDEA 127
           TPSPD PRKRHRRDS E++HK+TKK VSDFVDGIVKEQQQK +              DE 
Sbjct: 69  TPSPDPPRKRHRRDSTEEEHKETKKAVSDFVDGIVKEQQQKQQKDNGDGGGEAEGNEDEL 128

Query: 128 EMMKMLGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 183
           EMMKM GIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR
Sbjct: 129 EMMKMFGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 184


>Glyma17g06990.1 
          Length = 182

 Score =  174 bits (440), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/116 (77%), Positives = 94/116 (81%), Gaps = 2/116 (1%)

Query: 68  TPSPDQPRKRHRRDSVEDDHKDTKKVVSDFVDGIVKEQQQKHKXXXXXXXXXXXXXXDEA 127
           TPSPD PRKRHRRDS E+DHK+TKK VSDFVDGIVKEQQQK                 E 
Sbjct: 69  TPSPDPPRKRHRRDSAEEDHKETKKAVSDFVDGIVKEQQQKENGDGGEGEAEGSED--EL 126

Query: 128 EMMKMLGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 183
           E+MKM GIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAE+NR
Sbjct: 127 EIMKMFGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERNR 182


>Glyma08g23040.1 
          Length = 153

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 41/54 (75%)

Query: 129 MMKMLGIPTGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKN 182
           MMKM GIPT FDSTKGK VP ADV+ V A+TKRQ  QYMNR   FNRPL  E+N
Sbjct: 83  MMKMFGIPTIFDSTKGKLVPSADVNDVSAITKRQLCQYMNRHDEFNRPLLLERN 136