Miyakogusa Predicted Gene

Lj4g3v2094890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2094890.1 Non Chatacterized Hit- tr|C5YJI7|C5YJI7_SORBI
Putative uncharacterized protein Sb07g007800
OS=Sorghu,33.54,0.0000000004,seg,NULL,CUFF.50241.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07110.1                                                       246   9e-66

>Glyma17g07110.1 
          Length = 548

 Score =  246 bits (628), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 124/167 (74%), Positives = 140/167 (83%), Gaps = 1/167 (0%)

Query: 1   MDTDEVCSIVLELSEXXXXXXXXXXXXQCKGFSPKERIYL-NSSESGWENATAKRLLEIE 59
           MDTDE CSIVLELSE            Q KGFSPKERIYL +SS+ GW NAT + LL+I 
Sbjct: 3   MDTDEECSIVLELSERDPFFDKKKKLLQSKGFSPKERIYLKSSSKPGWMNATVEVLLQIA 62

Query: 60  RIIQLNELELYFAEDNGCTSVDFYSPRNELEALNSVVFLIDISLSSCSHLHTNILQGLRQ 119
           RI+QLNELELYFAED+ CTS++ YSPRNELEALNS+V L DISLS+C+HLHTNILQGLRQ
Sbjct: 63  RIVQLNELELYFAEDDVCTSMESYSPRNELEALNSIVLLTDISLSTCTHLHTNILQGLRQ 122

Query: 120 TMLDLISDFGDKNSVKGVVEIDHNCDQEEHMIEWGESNGLKTQLKIA 166
           T+LDLISDFGDKNSVKGVVE +H+CDQEE ++EWGESNGL TQLKIA
Sbjct: 123 TILDLISDFGDKNSVKGVVEKNHSCDQEERLLEWGESNGLMTQLKIA 169