Miyakogusa Predicted Gene

Lj4g3v2093730.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2093730.1 Non Chatacterized Hit- tr|C5XQN4|C5XQN4_SORBI
Putative uncharacterized protein Sb03g040990
OS=Sorghu,80.22,0,Yip1,Yip1 domain; seg,NULL; YIP1-RELATED,NULL; GOLGI
MEMBRANE PROTEIN YIP1,NULL,CUFF.50240.1
         (276 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g01030.1                                                       352   2e-97
Glyma17g07130.2                                                       352   4e-97
Glyma17g07130.1                                                       330   1e-90
Glyma13g01030.2                                                       206   3e-53
Glyma13g01030.3                                                       191   8e-49

>Glyma13g01030.1 
          Length = 274

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 204/283 (72%), Positives = 211/283 (74%), Gaps = 16/283 (5%)

Query: 1   MSHGDTIPLHPSSQSDIDEIENLIYAS-PATVLXXXXXXXXXXXIPVTTS-----SPFIN 54
           MSH DTIPLHPSSQSDIDEIENLI AS   +V            IPV+ S     SPFI+
Sbjct: 1   MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVSVSTAPSPFIS 60

Query: 55  SNLPAPLPP-KSSIXXXXXXXXXXXXXXXXXXXXXXXXSSGFGPAPNTLTEPVWDTVKRD 113
           SNLP P P  KSS+                        +SGFGPAPNTLTEPVWDTVKRD
Sbjct: 61  SNLPPPPPLPKSSVSAVTPSPPPPRPGIA---------TSGFGPAPNTLTEPVWDTVKRD 111

Query: 114 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEXXXXXX 173
           LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSE      
Sbjct: 112 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAF 171

Query: 174 XXXXXXXXILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKXXXXXXT 233
                   ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVI+K      T
Sbjct: 172 ALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKVVVVCVT 231

Query: 234 LAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
           LAWSSWAAYPFMSSAV+PRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 232 LAWSSWAAYPFMSSAVSPRRKALALYPVFLMYVSVGFLIIAID 274


>Glyma17g07130.2 
          Length = 272

 Score =  352 bits (902), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 204/281 (72%), Positives = 210/281 (74%), Gaps = 14/281 (4%)

Query: 1   MSHGDTIPLHPSSQSDIDEIENLIYAS-PATVLXXXXXXXXXXXIPVTTS---SPFINSN 56
           MSH DTIPLHPSSQSDIDEIENLI AS   +V            IPV+ S   SPFI+SN
Sbjct: 1   MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVSAAPSPFISSN 60

Query: 57  LPAPLPP-KSSIXXXXXXXXXXXXXXXXXXXXXXXXSSGFGPAPNTLTEPVWDTVKRDLS 115
           LP P P  KSS+                        SSGFG APNTLTEPVWDTVKRDLS
Sbjct: 61  LPPPPPLPKSSVSAVPPPPPPPRADIS---------SSGFGSAPNTLTEPVWDTVKRDLS 111

Query: 116 RIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEXXXXXXXX 175
           RIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSE        
Sbjct: 112 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 171

Query: 176 XXXXXXILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKXXXXXXTLA 235
                 ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVI+K      TLA
Sbjct: 172 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKVVVVCVTLA 231

Query: 236 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
           WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 232 WSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 272


>Glyma17g07130.1 
          Length = 281

 Score =  330 bits (846), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/269 (71%), Positives = 198/269 (73%), Gaps = 14/269 (5%)

Query: 1   MSHGDTIPLHPSSQSDIDEIENLIYAS-PATVLXXXXXXXXXXXIPVTTS---SPFINSN 56
           MSH DTIPLHPSSQSDIDEIENLI AS   +V            IPV+ S   SPFI+SN
Sbjct: 1   MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVSAAPSPFISSN 60

Query: 57  LPAPLPP-KSSIXXXXXXXXXXXXXXXXXXXXXXXXSSGFGPAPNTLTEPVWDTVKRDLS 115
           LP P P  KSS+                        SSGFG APNTLTEPVWDTVKRDLS
Sbjct: 61  LPPPPPLPKSSVSAVPPPPPPPRADIS---------SSGFGSAPNTLTEPVWDTVKRDLS 111

Query: 116 RIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEXXXXXXXX 175
           RIVSNLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSE        
Sbjct: 112 RIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAL 171

Query: 176 XXXXXXILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKXXXXXXTLA 235
                 ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVI+K      TLA
Sbjct: 172 LAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKVVVVCVTLA 231

Query: 236 WSSWAAYPFMSSAVNPRRKALALYPVFLM 264
           WSSWAAYPFMSSAVNPRRKALALYPVFLM
Sbjct: 232 WSSWAAYPFMSSAVNPRRKALALYPVFLM 260


>Glyma13g01030.2 
          Length = 208

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/197 (63%), Positives = 131/197 (66%), Gaps = 16/197 (8%)

Query: 1   MSHGDTIPLHPSSQSDIDEIENLIYAS-PATVLXXXXXXXXXXXIPVTTS-----SPFIN 54
           MSH DTIPLHPSSQSDIDEIENLI AS   +V            IPV+ S     SPFI+
Sbjct: 1   MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVSVSTAPSPFIS 60

Query: 55  SNLPAPLPP-KSSIXXXXXXXXXXXXXXXXXXXXXXXXSSGFGPAPNTLTEPVWDTVKRD 113
           SNLP P P  KSS+                        +SGFGPAPNTLTEPVWDTVKRD
Sbjct: 61  SNLPPPPPLPKSSVSAVTPSPPPPRPGIA---------TSGFGPAPNTLTEPVWDTVKRD 111

Query: 114 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEXXXXXX 173
           LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSE      
Sbjct: 112 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAF 171

Query: 174 XXXXXXXXILTLNVLLL 190
                   ILTLNVLLL
Sbjct: 172 ALLAAGAVILTLNVLLL 188


>Glyma13g01030.3 
          Length = 171

 Score =  191 bits (484), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/172 (66%), Positives = 120/172 (69%), Gaps = 16/172 (9%)

Query: 1   MSHGDTIPLHPSSQSDIDEIENLIYAS-PATVLXXXXXXXXXXXIPVTTS-----SPFIN 54
           MSH DTIPLHPSSQSDIDEIENLI AS   +V            IPV+ S     SPFI+
Sbjct: 1   MSHSDTIPLHPSSQSDIDEIENLINASVHQSVPSARPPSPPRASIPVSVSVSTAPSPFIS 60

Query: 55  SNLPAPLPP-KSSIXXXXXXXXXXXXXXXXXXXXXXXXSSGFGPAPNTLTEPVWDTVKRD 113
           SNLP P P  KSS+                        +SGFGPAPNTLTEPVWDTVKRD
Sbjct: 61  SNLPPPPPLPKSSVSAVTPSPPPPRPGIA---------TSGFGPAPNTLTEPVWDTVKRD 111

Query: 114 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKK 165
           LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGL LSWSASVKK
Sbjct: 112 LSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKK 163