Miyakogusa Predicted Gene
- Lj4g3v2046240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2046240.1 Non Chatacterized Hit- tr|Q5J7B4|Q5J7B4_GINBI
Putative 1-D-deoxyxylulose 5-phosphate synthase
OS=Gin,78.57,0.000002,Thiamin diphosphate-binding fold
(THDP-binding),NULL; DXP_synthase_N,Deoxyxylulose-5-phosphate
synth,CUFF.50184.1
(130 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g07400.1 192 9e-50
Glyma18g28830.1 165 1e-41
Glyma08g37680.1 154 3e-38
Glyma09g33320.1 150 5e-37
Glyma13g28470.1 139 8e-34
Glyma07g38260.2 136 5e-33
Glyma17g02480.2 136 5e-33
Glyma17g02480.3 136 6e-33
Glyma17g02480.1 136 6e-33
Glyma07g38260.3 134 2e-32
Glyma07g38260.1 134 2e-32
Glyma08g37670.1 121 1e-28
Glyma08g37670.2 121 2e-28
Glyma04g07400.1 105 1e-23
Glyma06g07490.1 88 3e-18
>Glyma17g07400.1
Length = 731
Score = 192 bits (488), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 115/178 (64%), Gaps = 55/178 (30%)
Query: 8 TNQQLPRKPLSFSGEKPSTPILDTINYPIHMKNLSIQ-------------------TYGH 48
TN Q R+ L+FSGEKPSTP+LDTINYPIHMKNLSIQ T GH
Sbjct: 64 TNPQRLRRSLNFSGEKPSTPVLDTINYPIHMKNLSIQELEELADELREEIVYTLSKTGGH 123
Query: 49 ------------------------------------KILTGRRSKMHSIRQTDGLAGFPK 72
KILTGRRSKMH+IRQT GLAGFPK
Sbjct: 124 LSSSLGVAELTVALHHVFNTPQDKIVWDVGHRTYAHKILTGRRSKMHTIRQTGGLAGFPK 183
Query: 73 RDESVHDAFGVGHSSTSISAALGMAVARDLMRKENHVVSVIGDGAMTAGQAYEAMNNA 130
RDES+HDAFGVGHSSTSISA+LGMAVARDL+ K+NHV+SVIGDGAMT GQAYEAMNNA
Sbjct: 184 RDESLHDAFGVGHSSTSISASLGMAVARDLIGKDNHVISVIGDGAMTGGQAYEAMNNA 241
>Glyma18g28830.1
Length = 650
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 101/164 (61%), Gaps = 55/164 (33%)
Query: 22 EKPSTPILDTINYPIHMKNLSIQ-------------------TYGH-------------- 48
EKP+T +LDTINYPIHMKNLS Q T GH
Sbjct: 1 EKPATLLLDTINYPIHMKNLSTQDLEQLAAELRADIVHTVSNTGGHLSSSLGVVELAVAL 60
Query: 49 ----------------------KILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHS 86
KILTGRRS+MH+IR+T GLAGFPKRDES+HDAFGVGHS
Sbjct: 61 HHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESIHDAFGVGHS 120
Query: 87 STSISAALGMAVARDLMRKENHVVSVIGDGAMTAGQAYEAMNNA 130
STSISA LGMAVARDL+ K N ++SVIGDGA+TAGQAYEAMNNA
Sbjct: 121 STSISAGLGMAVARDLLGKNNSIISVIGDGALTAGQAYEAMNNA 164
>Glyma08g37680.1
Length = 634
Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 80/87 (91%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q Y HKILTGRRS+MH+IR++ GLAGFPKRDESVHDAFGVGHSSTSISA LGMAVARDL+
Sbjct: 62 QAYPHKILTGRRSRMHTIRKSSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLL 121
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
K N ++SVIGDGA+TAGQAYEAMNNA
Sbjct: 122 GKNNSIISVIGDGALTAGQAYEAMNNA 148
>Glyma09g33320.1
Length = 624
Score = 150 bits (378), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q Y HKILTGRRS+MH+IR+T GLAGFPKR+ESV+D FG GHSSTSISA LGMAVARDL+
Sbjct: 55 QAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGLGMAVARDLL 114
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
K+N +VSVIGDGAMTAGQAYEAMNNA
Sbjct: 115 GKKNSIVSVIGDGAMTAGQAYEAMNNA 141
>Glyma13g28470.1
Length = 657
Score = 139 bits (350), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR KMH++RQTDGLAGF KR ES +D FG GHSST+ISA LGMAV RDL
Sbjct: 84 QSYPHKILTGRRDKMHTMRQTDGLAGFTKRSESDYDCFGTGHSSTTISAGLGMAVGRDLK 143
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
+N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 144 GDKNNVVAVIGDGAMTAGQAYEAMNNA 170
>Glyma07g38260.2
Length = 577
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 78/90 (86%)
Query: 41 LSIQTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVAR 100
+++Q+Y HKILTGRR +MH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV R
Sbjct: 1 MNLQSYPHKILTGRRDQMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGR 60
Query: 101 DLMRKENHVVSVIGDGAMTAGQAYEAMNNA 130
DL ++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 61 DLKGRKNNVVAVIGDGAMTAGQAYEAMNNA 90
>Glyma17g02480.2
Length = 476
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR KMH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV RDL
Sbjct: 139 QSYPHKILTGRRDKMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLK 198
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 199 GRKNNVVAVIGDGAMTAGQAYEAMNNA 225
>Glyma17g02480.3
Length = 583
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR KMH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV RDL
Sbjct: 139 QSYPHKILTGRRDKMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLK 198
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 199 GRKNNVVAVIGDGAMTAGQAYEAMNNA 225
>Glyma17g02480.1
Length = 712
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR KMH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV RDL
Sbjct: 139 QSYPHKILTGRRDKMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLK 198
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 199 GRKNNVVAVIGDGAMTAGQAYEAMNNA 225
>Glyma07g38260.3
Length = 630
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR +MH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV RDL
Sbjct: 57 QSYPHKILTGRRDQMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLK 116
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 117 GRKNNVVAVIGDGAMTAGQAYEAMNNA 143
>Glyma07g38260.1
Length = 708
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 75/87 (86%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q+Y HKILTGRR +MH++RQT+GL+GF KR ES D FG GHSST+ISA LGMAV RDL
Sbjct: 135 QSYPHKILTGRRDQMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLK 194
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
++N+VV+VIGDGAMTAGQAYEAMNNA
Sbjct: 195 GRKNNVVAVIGDGAMTAGQAYEAMNNA 221
>Glyma08g37670.1
Length = 697
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 66/87 (75%), Gaps = 17/87 (19%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q Y HKILTGRRS+MH+IR+T GLAGFPKRDESVHDAFGVGHSSTSISA L
Sbjct: 142 QAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL--------- 192
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
VIGDGA+TAGQAYEAMNNA
Sbjct: 193 --------VIGDGALTAGQAYEAMNNA 211
>Glyma08g37670.2
Length = 559
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 66/87 (75%), Gaps = 17/87 (19%)
Query: 44 QTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSSTSISAALGMAVARDLM 103
Q Y HKILTGRRS+MH+IR+T GLAGFPKRDESVHDAFGVGHSSTSISA L
Sbjct: 142 QAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL--------- 192
Query: 104 RKENHVVSVIGDGAMTAGQAYEAMNNA 130
VIGDGA+TAGQAYEAMNNA
Sbjct: 193 --------VIGDGALTAGQAYEAMNNA 211
>Glyma04g07400.1
Length = 646
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 31 TINYPIH--MKNLSIQTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSST 88
N P+ + ++ QTY HKILTGRRS M ++R+ +GL+G R ES +DAFG GH +
Sbjct: 70 VFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGVTSRFESEYDAFGAGHGCS 129
Query: 89 SISAALGMAVARDLMRKENHVVSVIGDGAMTAGQAYEAMNNA 130
SISA LGMAVARD+ + V++VI + AGQAYEAM+NA
Sbjct: 130 SISAGLGMAVARDIKGRRERVIAVISNWTTMAGQAYEAMSNA 171
>Glyma06g07490.1
Length = 629
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 13/102 (12%)
Query: 31 TINYPIH--MKNLSIQTYGHKILTGRRSKMHSIRQTDGLAGFPKRDESVHDAFGVGHSST 88
N P+ + ++ QTY HKILTGRRS M ++R+ +GL+GF R ES +DAFG
Sbjct: 54 VFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFGA----- 108
Query: 89 SISAALGMAVARDLMRKENHVVSVIGDGAMTAGQAYEAMNNA 130
GMAVARD+ ++ VV+VI + AGQAYEAM+NA
Sbjct: 109 ------GMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNA 144