Miyakogusa Predicted Gene

Lj4g3v2018290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2018290.1 tr|D3BIG1|D3BIG1_POLPA Transmembrane protein
OS=Polysphondylium pallidum GN=tmem208 PE=4 SV=1,34.5,3e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,Protein of unknown function DUF788,
TMEM208; seg,NULL; DU,CUFF.50107.1
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07780.1                                                       259   7e-70
Glyma02g36980.1                                                       258   2e-69

>Glyma17g07780.1 
          Length = 173

 Score =  259 bits (663), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 125/174 (71%), Positives = 136/174 (78%), Gaps = 1/174 (0%)

Query: 1   MAKQGAKKRKDENARHMARLRLXXXXXXXXXXXXRMFFYYSTFTWKHWIGLVVTSLAYYV 60
           MA QGAKKRK+ENARHMARLR             RM  ++S+FTWKHWIGL+VTSLAY +
Sbjct: 1   MANQGAKKRKEENARHMARLRQIIIACNVIYVLLRMLVFHSSFTWKHWIGLIVTSLAYVI 60

Query: 61  PYQQLDKMATPSYAEDGELLDGGFDMATGGVCGYLHDIIYITCFVQVASIISGKFWYTYL 120
           PYQQL KMATP+YAEDGELLDGGFDM+TGGVCGYLHD+IYITCFVQV SI+SGKFWYTYL
Sbjct: 61  PYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIVSGKFWYTYL 120

Query: 121 VIPAFGAYQSFGLIKGFLPQGSSEESYXXXXXXXXXXXXXXXASRPKFVKTRTR 174
           VIPAFGAYQSFG IKGFLP G SEES+               ASRPKF KTRTR
Sbjct: 121 VIPAFGAYQSFGFIKGFLP-GGSEESFEDEKTRKKREKMEKKASRPKFAKTRTR 173


>Glyma02g36980.1 
          Length = 173

 Score =  258 bits (659), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/174 (71%), Positives = 136/174 (78%), Gaps = 1/174 (0%)

Query: 1   MAKQGAKKRKDENARHMARLRLXXXXXXXXXXXXRMFFYYSTFTWKHWIGLVVTSLAYYV 60
           MA QGAKKRK+ENARHMARLR             RM  ++S+FTWKHWIGL+VTSLAY +
Sbjct: 1   MANQGAKKRKEENARHMARLRQIIIACNVIYVLLRMLVFHSSFTWKHWIGLIVTSLAYVI 60

Query: 61  PYQQLDKMATPSYAEDGELLDGGFDMATGGVCGYLHDIIYITCFVQVASIISGKFWYTYL 120
           PYQQL KMATP+YAEDGELLDGGFDM+TGGVCGYLHD+IYITCFVQV SI+SGKFWYTYL
Sbjct: 61  PYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIVSGKFWYTYL 120

Query: 121 VIPAFGAYQSFGLIKGFLPQGSSEESYXXXXXXXXXXXXXXXASRPKFVKTRTR 174
           VIPAFGAY+SFG IKGFLP G SEES+               ASRPKF KTRTR
Sbjct: 121 VIPAFGAYKSFGFIKGFLP-GGSEESFEDEKTRKKREKMEKKASRPKFAKTRTR 173