Miyakogusa Predicted Gene

Lj4g3v2016180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2016180.1 tr|F2CS60|F2CS60_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,45.28,2e-19,seg,NULL; no
description,NULL; GLUTAMINE AMIDOTRANSFERASE CLASS-I FAMILY
PROTEIN,NULL; GMP SYNTHASE-,CUFF.50099.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07850.1                                                       138   1e-33
Glyma08g07140.1                                                        94   3e-20
Glyma07g30170.1                                                        93   6e-20
Glyma13g32920.1                                                        93   8e-20

>Glyma17g07850.1 
          Length = 244

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 78/105 (74%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           RRYALL A  DS+              EAFGE G+ WDLFRV + +FPDF++L+KY GFV
Sbjct: 1   RRYALLLAVNDSEYVKKAYGGYYNVYVEAFGEEGDTWDLFRVYDGDFPDFSDLNKYHGFV 60

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQAHFQA 112
           ITGS +DA+GNDYWILKLCFMLQ LDAM+KKVLGICFGHQ   +A
Sbjct: 61  ITGSPSDAYGNDYWILKLCFMLQTLDAMQKKVLGICFGHQVLCRA 105


>Glyma08g07140.1 
          Length = 244

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 63/102 (61%)

Query: 6   EGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDG 65
           E +R+ +L  A+DS+                  E GE WD+++V   +FPD ++L  YDG
Sbjct: 2   EKKRFGVLMCAEDSEYVKKVYGGYSGVFVRMLAEEGETWDVYKVACGDFPDEDDLGLYDG 61

Query: 66  FVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           FVITGS +DA GND W+  L  +L+ LD+M KK+LGICFGHQ
Sbjct: 62  FVITGSCSDAHGNDTWVNDLLNLLRKLDSMNKKILGICFGHQ 103


>Glyma07g30170.1 
          Length = 245

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 61/100 (61%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           +R+ +L  A+DS+                  E GE WD+++V   EFPD ++L  YDGFV
Sbjct: 5   KRFGVLMCAEDSEYVKKVYGGYSGVFVRMLAEEGETWDVYKVARGEFPDEDDLGLYDGFV 64

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           ITGS +DA GND W+  L  +L+ LD++  K+LGICFGHQ
Sbjct: 65  ITGSCSDAHGNDTWVSDLLNLLRKLDSINTKILGICFGHQ 104


>Glyma13g32920.1 
          Length = 244

 Score = 92.8 bits (229), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 67/115 (58%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           +RYALL   +DS+              +   E  E+WDL+++ + EFP+ ++L  YDGFV
Sbjct: 4   KRYALLMCGEDSEYLVKMHGGTYGVFMKLLQEQEEKWDLYKLVQGEFPEQHDLPLYDGFV 63

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQAHFQACLSQFFFSKN 122
           I+GS  DA  ND WIL L  ++  LD+M KK+LGICFGHQ   +A   +   S N
Sbjct: 64  ISGSCYDAHANDPWILDLIALVIKLDSMHKKILGICFGHQIIGRALGGKVGRSPN 118