Miyakogusa Predicted Gene

Lj4g3v1985740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1985740.1 Non Chatacterized Hit- tr|G7JFL6|G7JFL6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,47.92,7e-16,zf-met,NULL; U1-like zinc finger,Zinc finger,
U1-type; seg,NULL; C2H2 and C2HC zinc fingers,NULL,CUFF.50066.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36630.1                                                        83   1e-16
Glyma02g36630.2                                                        79   2e-15
Glyma17g27180.1                                                        75   2e-14
Glyma17g08060.1                                                        69   2e-12

>Glyma02g36630.1 
          Length = 332

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 7/98 (7%)

Query: 3   QPRFMDITEIKPANNHDEVIQLAKPNPGV--YDAKRKAAEPAV----NETQFGLMKKPKK 56
           QPR     +IK +N  D+VI LA   P V  Y AKRKA +P      + + F + KKPK+
Sbjct: 144 QPRLPPQIDIKQSNK-DKVIILAGAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKR 202

Query: 57  AWRCELCGVSTTDERGLNMHLSGKKHKAKEAQRAEKIG 94
            W C LC ++TT+E+GLN HL GKKHKAK + R +KIG
Sbjct: 203 EWSCGLCQITTTNEKGLNNHLEGKKHKAKASLRTKKIG 240


>Glyma02g36630.2 
          Length = 326

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 9/96 (9%)

Query: 3   QPRFMDITEIKPANNHDEVIQLAKPNPGVYDAKRKAAEPAV----NETQFGLMKKPKKAW 58
           QPR     +IK +N        AKP+   Y AKRKA +P      + + F + KKPK+ W
Sbjct: 144 QPRLPPQIDIKQSNKDK-----AKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREW 198

Query: 59  RCELCGVSTTDERGLNMHLSGKKHKAKEAQRAEKIG 94
            C LC ++TT+E+GLN HL GKKHKAK + R +KIG
Sbjct: 199 SCGLCQITTTNEKGLNNHLEGKKHKAKASLRTKKIG 234


>Glyma17g27180.1 
          Length = 361

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 3/82 (3%)

Query: 15  ANNHDEVIQLAKPNPGVYDAKRKAAEPAVNETQFGLMKKPKKAWRCELCGVSTTDERGLN 74
           +N+ D+VI L KP+    + KRKA   A+++ +  L KK KK W CELC +STT E+GLN
Sbjct: 166 SNSKDKVIILNKPDDHCGE-KRKAITLAIDDNE-SLRKKAKKEWTCELCQISTTSEKGLN 223

Query: 75  MHLSGKKHKA-KEAQRAEKIGK 95
            H+ GKKHKA KE+ R +KIGK
Sbjct: 224 DHIQGKKHKANKESTRTQKIGK 245


>Glyma17g08060.1 
          Length = 330

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 20/117 (17%)

Query: 35  KRKAAEPAVNETQFGLMKKPKKAWRCELCGVSTTDERGLNMHLSGKKHKA-KEAQRAEKI 93
           KRKA    +++ +  L KK KK W CELC +STT E+GLN H+ GKKHKA KE+ R +KI
Sbjct: 179 KRKAVTLPIDDNE-SLQKKAKKEWTCELCQISTTSEKGLNDHIQGKKHKANKESTRTQKI 237

Query: 94  GKXXXXXXXXXXXNMNVKSXXXXXXXXXXSGLDAKPDIQTHHALVVGGMTQNNVDAV 150
           GK            +++K             LD++P+ +T H  +     QN    +
Sbjct: 238 GK-------RKKTTLSLKKR-----------LDSRPERETLHPCLTPADDQNETTTI 276