Miyakogusa Predicted Gene

Lj4g3v1983680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983680.1 Non Chatacterized Hit- tr|B9STT6|B9STT6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,31.48,3e-16,seg,NULL; C2H2 and C2HC zinc fingers,NULL; U1-like zinc
finger,Zinc finger, U1-type; zinc finger,Zin,CUFF.50060.1
         (669 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36630.1                                                        82   2e-15
Glyma02g36630.2                                                        79   1e-14
Glyma17g27180.1                                                        66   1e-10
Glyma17g08060.1                                                        62   3e-09
Glyma08g07120.1                                                        51   5e-06

>Glyma02g36630.1 
          Length = 332

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 97/186 (52%), Gaps = 42/186 (22%)

Query: 332 QQNNLNEVIV--QAKPDTDLYDAKRKA-EAPAVND---SQFGLIKKPK-EWGCMLCGVTA 384
           +Q+N ++VI+   AKPD D Y AKRKA + P ++D   S F + KKPK EW C LC +T 
Sbjct: 154 KQSNKDKVIILAGAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITT 213

Query: 385 PDENSLNLHLNGKKHKTKEAALEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAKEDI 444
            +E  LN HL GKKHK K A+L  +KI                         G +A+ D 
Sbjct: 214 TNEKGLNNHLEGKKHKAK-ASLRTKKI-------------------------GLDARLDG 247

Query: 445 KTHQALGGEDMTQQNVDSSAAEANKEEQVVQKSQNI-GVSEINEV-TTEEADKTNAFVGR 502
           +  Q      +T  N+     E  KE+QVVQ SQ + G+   NE+ T++E  +TNA   R
Sbjct: 248 QKLQ----RGITSTNI--GILEPRKEDQVVQNSQGLGGLDNENEIATSKETGETNALTKR 301

Query: 503 -EMKFW 507
            + KF+
Sbjct: 302 KKFKFY 307



 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 6/72 (8%)

Query: 80  QQNNLDEVIVLA--KPDTDLYDAKRKA-EAPAVND---SQICLIKKPKKEWGCMLCGVTA 133
           +Q+N D+VI+LA  KPD D Y AKRKA + P ++D   S   + KKPK+EW C LC +T 
Sbjct: 154 KQSNKDKVIILAGAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITT 213

Query: 134 FDENSLNVHLNG 145
            +E  LN HL G
Sbjct: 214 TNEKGLNNHLEG 225



 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 6/72 (8%)

Query: 206 QQNNLDEVIV--QVKPDTDLYDAKRKA-EAPAVND---SQIYLIKKPKKEWGCMLCGVTA 259
           +Q+N D+VI+    KPD D Y AKRKA + P ++D   S   + KKPK+EW C LC +T 
Sbjct: 154 KQSNKDKVIILAGAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITT 213

Query: 260 FDENSLNVHLNG 271
            +E  LN HL G
Sbjct: 214 TNEKGLNNHLEG 225



 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 34/144 (23%)

Query: 507 WGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTETIINT 566
           W C LC +T T+   LN HL G+KHKA+ A+L  +K                        
Sbjct: 204 WSCGLCQITTTNEKGLNNHLEGKKHKAK-ASLRTKKI----------------------- 239

Query: 567 TSGLDAKAWGGEDESQKNVDSSAV---DANKEEQVVQKSQNI-GVSEINEV-TTEEAGKT 621
             GLDA+  G   + Q+ + S+ +   +  KE+QVVQ SQ + G+   NE+ T++E G+T
Sbjct: 240 --GLDARLDG--QKLQRGITSTNIGILEPRKEDQVVQNSQGLGGLDNENEIATSKETGET 295

Query: 622 NALVGRKR-ELWCDICGISATSQL 644
           NAL  RK+ + +C         +L
Sbjct: 296 NALTKRKKFKFYCAFVKFKLPQKL 319


>Glyma02g36630.2 
          Length = 326

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 40/174 (22%)

Query: 342 QAKPDTDLYDAKRKA-EAPAVND---SQFGLIKKPK-EWGCMLCGVTAPDENSLNLHLNG 396
           +AKPD D Y AKRKA + P ++D   S F + KKPK EW C LC +T  +E  LN HL G
Sbjct: 160 KAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITTTNEKGLNNHLEG 219

Query: 397 KKHKTKEAALEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAKEDIKTHQALGGEDMT 456
           KKHK K A+L  +KI                         G +A+ D +  Q      +T
Sbjct: 220 KKHKAK-ASLRTKKI-------------------------GLDARLDGQKLQ----RGIT 249

Query: 457 QQNVDSSAAEANKEEQVVQKSQNI-GVSEINEV-TTEEADKTNAFVGR-EMKFW 507
             N+     E  KE+QVVQ SQ + G+   NE+ T++E  +TNA   R + KF+
Sbjct: 250 STNI--GILEPRKEDQVVQNSQGLGGLDNENEIATSKETGETNALTKRKKFKFY 301



 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 34/144 (23%)

Query: 507 WGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTETIINT 566
           W C LC +T T+   LN HL G+KHKA+ A+L  +K                        
Sbjct: 198 WSCGLCQITTTNEKGLNNHLEGKKHKAK-ASLRTKKI----------------------- 233

Query: 567 TSGLDAKAWGGEDESQKNVDSSAV---DANKEEQVVQKSQNI-GVSEINEV-TTEEAGKT 621
             GLDA+  G   + Q+ + S+ +   +  KE+QVVQ SQ + G+   NE+ T++E G+T
Sbjct: 234 --GLDARLDG--QKLQRGITSTNIGILEPRKEDQVVQNSQGLGGLDNENEIATSKETGET 289

Query: 622 NALVGRKR-ELWCDICGISATSQL 644
           NAL  RK+ + +C         +L
Sbjct: 290 NALTKRKKFKFYCAFVKFKLPQKL 313



 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 8/70 (11%)

Query: 80  QQNNLDEVIVLAKPDTDLYDAKRKA-EAPAVND---SQICLIKKPKKEWGCMLCGVTAFD 135
           +Q+N D+    AKPD D Y AKRKA + P ++D   S   + KKPK+EW C LC +T  +
Sbjct: 154 KQSNKDK----AKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITTTN 209

Query: 136 ENSLNVHLNG 145
           E  LN HL G
Sbjct: 210 EKGLNNHLEG 219



 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 8/70 (11%)

Query: 206 QQNNLDEVIVQVKPDTDLYDAKRKA-EAPAVND---SQIYLIKKPKKEWGCMLCGVTAFD 261
           +Q+N D    + KPD D Y AKRKA + P ++D   S   + KKPK+EW C LC +T  +
Sbjct: 154 KQSNKD----KAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKPKREWSCGLCQITTTN 209

Query: 262 ENSLNVHLNG 271
           E  LN HL G
Sbjct: 210 EKGLNNHLEG 219


>Glyma17g27180.1 
          Length = 361

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 31/204 (15%)

Query: 460 VDSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFVGREMKFWGCKLCGVTATDA 519
            D+  A  +K++ ++    +    E  +  T   D   +   +  K W C+LC ++ T  
Sbjct: 160 FDNKEASNSKDKVIILNKPDDHCGEKRKAITLAIDDNESLRKKAKKEWTCELCQISTTSE 219

Query: 520 SSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKS---TETIINTTSGLDAKAWG 576
             LN H+ G+KHKA + +   +K  +   ++LS  K + S   +ET+    +        
Sbjct: 220 KGLNDHIQGKKHKANKESTRTQKIGKRKKTTLSLKKRLDSRPESETLHPCFTP------- 272

Query: 577 GEDESQKNVDSSAVDANKEEQVVQKSQNIGVSEINEVTTEEAGKTNALV-GRKRELWCDI 635
                    D+  +++ ++ QVV KS+ +            A +T+AL  G+K + WC++
Sbjct: 273 --------ADTCNMESEEKGQVVPKSKGL------------AQETSALSKGKKFDFWCEL 312

Query: 636 CGISATSQLQMEDHKKGSKHRRRM 659
           C +   S++ M+ H+ G KH R M
Sbjct: 313 CQVQTQSEIVMQSHQNGKKHLRNM 336



 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 334 NNLNEVIVQAKPDTDLYDAKRKAEAPAVNDSQFGLIKKPKEWGCMLCGVTAPDENSLNLH 393
           N+ ++VI+  KPD D    KRKA   A++D++    K  KEW C LC ++   E  LN H
Sbjct: 167 NSKDKVIILNKPD-DHCGEKRKAITLAIDDNESLRKKAKKEWTCELCQISTTSEKGLNDH 225

Query: 394 LNGKKHKTKEAALEAEKIVMXXXXXXXXXXXXXXXXXIITTTSGFNAKEDIKT-HQALGG 452
           + GKKHK  + +   +KI                    ++     +++ + +T H     
Sbjct: 226 IQGKKHKANKESTRTQKI-------------GKRKKTTLSLKKRLDSRPESETLHPCFTP 272

Query: 453 EDMTQQNVDSSAAEANKEEQVVQKSQNIGVSEINEVTTEEADKTNAFV-GREMKFWGCKL 511
                   D+   E+ ++ QVV KS+ +            A +T+A   G++  FW C+L
Sbjct: 273 -------ADTCNMESEEKGQVVPKSKGL------------AQETSALSKGKKFDFW-CEL 312

Query: 512 CGVTATDASSLNAHLFGRKH 531
           C V       + +H  G+KH
Sbjct: 313 CQVQTQSEIVMQSHQNGKKH 332



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 82  NNLDEVIVLAKPDTDLYDAKRKAEAPAVNDSQICLIKKPKKEWGCMLCGVTAFDENSLNV 141
           N+ D+VI+L KPD D    KRKA   A++D++  L KK KKEW C LC ++   E  LN 
Sbjct: 167 NSKDKVIILNKPD-DHCGEKRKAITLAIDDNE-SLRKKAKKEWTCELCQISTTSEKGLND 224

Query: 142 HLNGXXXXXXXXXXXXXXIVKSTFSLLSPPKNLKS 176
           H+ G              I K   + LS  K L S
Sbjct: 225 HIQGKKHKANKESTRTQKIGKRKKTTLSLKKRLDS 259



 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 77/198 (38%), Gaps = 26/198 (13%)

Query: 202 DDMTQQNNLDEVIVQVKPDTDLYDAKRKAEAPAVNDSQIYLIKKPKKEWGCMLCGVTAFD 261
           D+    N+ D+VI+  KPD D    KRKA   A++D++  L KK KKEW C LC ++   
Sbjct: 161 DNKEASNSKDKVIILNKPD-DHCGEKRKAITLAIDDNE-SLRKKAKKEWTCELCQISTTS 218

Query: 262 ENSLNVHLNGXXXXXXXXXXXXXXIVKSTFSLLSPTKNLKSTDTIITTTSGLNAKEDIKT 321
           E  LN H+ G              I K   + LS  K L S              E    
Sbjct: 219 EKGLNDHIQGKKHKANKESTRTQKIGKRKKTTLSLKKRLDSRP------------ESETL 266

Query: 322 HQALGGEDMTQQNNLNEVIVQAKPDTDLYDAKRKAEAPAVNDSQFGLIKKPKEWGCMLCG 381
           H      D    N  +E   Q  P         K++  A   S     KK   W C LC 
Sbjct: 267 HPCFTPADTC--NMESEEKGQVVP---------KSKGLAQETSALSKGKKFDFW-CELCQ 314

Query: 382 VTAPDENSLNLHLNGKKH 399
           V    E  +  H NGKKH
Sbjct: 315 VQTQSEIVMQSHQNGKKH 332


>Glyma17g08060.1 
          Length = 330

 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 32/153 (20%)

Query: 507 WGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTETIINT 566
           W C+LC ++ T    LN H+ G+KHKA + +   +K  +   ++LS  K           
Sbjct: 201 WTCELCQISTTSEKGLNDHIQGKKHKANKESTRTQKIGKRKKTTLSLKKR---------- 250

Query: 567 TSGLDAKAWGGEDESQKNVDSSAVDANKEEQVVQKSQNIGVSEINEVTTEEAGKTNALVG 626
              LD++    E E+     + A D N+   + Q  +    S+                G
Sbjct: 251 ---LDSRP---ERETLHPCLTPADDQNETTTIKQAQETSAPSK----------------G 288

Query: 627 RKRELWCDICGISATSQLQMEDHKKGSKHRRRM 659
           +K E WC++C +   S++ M+ HK G KH R M
Sbjct: 289 KKFEFWCELCQVQTHSEIVMQSHKNGKKHLRNM 321


>Glyma08g07120.1 
          Length = 386

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 29/155 (18%)

Query: 507 WGCKLCGVTATDASSLNAHLFGRKHKAREAALGAEKTVRSTTSSLSAMKNVKSTETIINT 566
           W C LC VT +   +L  HL GRKHKA   +L A+               VKS ++    
Sbjct: 257 WTCALCHVTTSSEKTLIDHLHGRKHKATCESLKAQNQ--------PVPHKVKSDQS---- 304

Query: 567 TSGLDAKAWGGEDESQKNVDSSAVDANKE-EQVVQKSQNIGVSEINEVTTEEAGKTNALV 625
                      +D  QKNV        K  E+V +++ +  V ++ +   E AG +N+  
Sbjct: 305 ----------KDDLKQKNVIYQINSKTKSGEKVGKEAMDHKVQKLQKKLYEPAGTSNS-- 352

Query: 626 GRKRELWCDICGISATSQLQMEDHKKGSKHRRRME 660
               +  C++C +    ++ +  HK G KH  +++
Sbjct: 353 ----KFLCEVCNVYCPCEIALASHKNGKKHLAKIK 383