Miyakogusa Predicted Gene

Lj4g3v1983660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983660.1 Non Chatacterized Hit- tr|D7MBT8|D7MBT8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,35.8,7e-16,coiled-coil,NULL; seg,NULL,CUFF.50058.1
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36620.1                                                       293   1e-79
Glyma17g08070.1                                                       288   5e-78
Glyma17g08070.2                                                       197   9e-51

>Glyma02g36620.1 
          Length = 259

 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/268 (60%), Positives = 192/268 (71%), Gaps = 16/268 (5%)

Query: 1   MKKMKGVVVSMESPSDLFMDRRAMLRHQSLLQDYEDLHRETEAMRRKLPAIKQKKLTLSA 60
           MKKMKGVV  ME P +++ D+RA LRHQSLLQDYEDLH+ETEAMRRKL A KQKK  L  
Sbjct: 1   MKKMKGVV-PMEPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATKQKKFMLED 59

Query: 61  DVRFLRQRYXXXXXXXXXXXXXXXXXXXXXXIKIQAPTIPKGRNYNRKESTLRPPRIASN 120
           +VRFLRQRY                      +KIQAP I KG+NYN+KE  LRP   AS+
Sbjct: 60  EVRFLRQRYNYLLKHPILKPQPKQQVVKPQKLKIQAPIISKGKNYNKKEPNLRPHHPASH 119

Query: 121 MNPPKERSSNGGVENT----LQKSGHVFDLNQNARNSSKKDASFHNSA-PVLDLNH-DRI 174
           +N      SNG + N     L+K+GH+FDLN NAR+SSKKDAS + S  PVL+LNH +RI
Sbjct: 120 LN------SNGRISNVADVPLKKTGHLFDLNLNARSSSKKDASINISGPPVLNLNHKERI 173

Query: 175 HSGKETSQTTKSSAPFFDLNQISREEEELQGNTEPLWIEEPKRSALRVVSEEQLNDVKLS 234
           +S KE   T KS  PFFDLNQISREEEELQGN+EP+ IEEPKRS+ RV ++EQ  D+KLS
Sbjct: 174 NSSKEA--TKKSVTPFFDLNQISREEEELQGNSEPMGIEEPKRSSQRVATDEQHGDIKLS 231

Query: 235 -VCRNIGDGPSRAVKRKISWQDQVALRV 261
             CR++GDG +RA KRKISWQDQVALRV
Sbjct: 232 AACRSVGDGSNRAGKRKISWQDQVALRV 259


>Glyma17g08070.1 
          Length = 257

 Score =  288 bits (736), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 161/268 (60%), Positives = 193/268 (72%), Gaps = 18/268 (6%)

Query: 1   MKKMKGVVVSMESPSDLFMDRRAMLRHQSLLQDYEDLHRETEAMRRKLPAIKQKKLTLSA 60
           MKKMKGVV S++ P +++ D+RA LRHQSLLQDYEDLH+ETEAMRRKL A +QKKL L  
Sbjct: 1   MKKMKGVV-SLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLED 59

Query: 61  DVRFLRQRYXXXXXXXXXXXXXXXXXXXXXXIKIQAPTIPKGRNYNRKESTLRPPRIASN 120
           +VRFLRQRY                      +K+QAP I KG+NY+RKE TLRP      
Sbjct: 60  EVRFLRQRY-NYLLKHPILKPHPKQVVKPQKLKLQAPIISKGKNYSRKEPTLRP------ 112

Query: 121 MNPPKERSSNGGVENT----LQKSGHVFDLNQNARNSSKKDASFHNSA-PVLDLNH-DRI 174
            +P    +SNG + N     L+K+GH+FDLN NAR+SSKKDASF+ SA PV +LNH +RI
Sbjct: 113 -HPTSHLNSNGRISNVAEAPLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERI 171

Query: 175 HSGKETSQTTKSSAPFFDLNQISREEEELQGNTEPLWIEEPKRSALRVVSEEQLNDVKLS 234
           HS KE   T KS  PFFDLNQISREEEELQGN+E + IEEPKRS  RV ++EQ +D+KLS
Sbjct: 172 HSSKEA--TKKSVTPFFDLNQISREEEELQGNSEAMRIEEPKRSTQRVATDEQHSDIKLS 229

Query: 235 -VCRNIGDGPSRAVKRKISWQDQVALRV 261
             CR++GDG +RA KRKISWQDQVALRV
Sbjct: 230 AACRSVGDGSNRAGKRKISWQDQVALRV 257


>Glyma17g08070.2 
          Length = 202

 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/203 (56%), Positives = 138/203 (67%), Gaps = 17/203 (8%)

Query: 1   MKKMKGVVVSMESPSDLFMDRRAMLRHQSLLQDYEDLHRETEAMRRKLPAIKQKKLTLSA 60
           MKKMKGVV S++ P +++ D+RA LRHQSLLQDYEDLH+ETEAMRRKL A +QKKL L  
Sbjct: 1   MKKMKGVV-SLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLED 59

Query: 61  DVRFLRQRYXXXXXXXXXXXXXXXXXXXXXXIKIQAPTIPKGRNYNRKESTLRPPRIASN 120
           +VRFLRQRY                      +K+QAP I KG+NY+RKE TLRP      
Sbjct: 60  EVRFLRQRY-NYLLKHPILKPHPKQVVKPQKLKLQAPIISKGKNYSRKEPTLRP------ 112

Query: 121 MNPPKERSSNGGVENT----LQKSGHVFDLNQNARNSSKKDASFHNSA-PVLDLNH-DRI 174
            +P    +SNG + N     L+K+GH+FDLN NAR+SSKKDASF+ SA PV +LNH +RI
Sbjct: 113 -HPTSHLNSNGRISNVAEAPLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERI 171

Query: 175 HSGKETSQTTKSSAPFFDLNQIS 197
           HS KE   T KS  PFFDLNQIS
Sbjct: 172 HSSKEA--TKKSVTPFFDLNQIS 192