Miyakogusa Predicted Gene

Lj4g3v1983570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983570.1 Non Chatacterized Hit- tr|I1JGP9|I1JGP9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.22,0,Exo_endo_phos,Endonuclease/exonuclease/phosphatase; DNase
I-like,Endonuclease/exonuclease/phosphatas,CUFF.50056.1
         (273 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36540.1                                                       546   e-155
Glyma17g08140.1                                                       541   e-154
Glyma19g28510.1                                                       141   1e-33

>Glyma02g36540.1 
          Length = 310

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 260/273 (95%), Positives = 268/273 (98%)

Query: 1   MSVSLTVMTFNLHDDQPPDSPNSWEKRRDICISVITSYSPFILCTQQGVKAQLDFLQQGL 60
           MSVSLTVMTFNLHDD+P DSPNSWEKRRD+CISVITSYSP ILCTQQGVKAQLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLHDDEPQDSPNSWEKRRDMCISVITSYSPIILCTQQGVKAQLDFLQQGL 60

Query: 61  PGYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120
           PGYDQFGISRKGPQD++D+HCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA
Sbjct: 61  PGYDQFGISRKGPQDTTDQHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 TWATFQLKGVELPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180
           TWATFQLKGVE PGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIF 240
           QKESTTGRFLLGRSREHGVVGDMRDAWPS+RVRKNVSLI TYHGFKG+KQGTLE+LKLIF
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVSLIHTYHGFKGDKQGTLEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHIDWIFFRGRSLIPVSCEV 273
           RALCLCWDRQTQDLHIDWI FRGRSLIPVSCEV
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEV 273


>Glyma17g08140.1 
          Length = 310

 Score =  541 bits (1395), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/273 (94%), Positives = 267/273 (97%)

Query: 1   MSVSLTVMTFNLHDDQPPDSPNSWEKRRDICISVITSYSPFILCTQQGVKAQLDFLQQGL 60
           MSVSLTVMTFNL+DD+P DSPNSWEKRRD+CISVITSYSP ILCTQQGVKAQLDFLQQGL
Sbjct: 1   MSVSLTVMTFNLYDDEPQDSPNSWEKRRDLCISVITSYSPIILCTQQGVKAQLDFLQQGL 60

Query: 61  PGYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120
           PGYDQFGISRKGPQD++ EHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA
Sbjct: 61  PGYDQFGISRKGPQDTTSEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSEVPCIA 120

Query: 121 TWATFQLKGVELPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180
           TWATFQLKGVE PGFSFQIVNT MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT
Sbjct: 121 TWATFQLKGVEPPGFSFQIVNTIMDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNT 180

Query: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIF 240
           QKESTTGRFLLGRSREHGVVGDMRDAWPS+RVRKNVSLIRTYHGFKG+KQGTLE+LKLIF
Sbjct: 181 QKESTTGRFLLGRSREHGVVGDMRDAWPSARVRKNVSLIRTYHGFKGDKQGTLEFLKLIF 240

Query: 241 RALCLCWDRQTQDLHIDWIFFRGRSLIPVSCEV 273
           RALCLCWDRQTQDLHIDWI FRGRSLIPVSCEV
Sbjct: 241 RALCLCWDRQTQDLHIDWILFRGRSLIPVSCEV 273


>Glyma19g28510.1 
          Length = 280

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 113/196 (57%), Gaps = 30/196 (15%)

Query: 62  GYDQFGISRKGPQDSSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSE-VPCIA 120
           GYD F IS+KG +D++DEHC IFYDKEKVEL+EGGTFWL +SPS+PGSMSWG+E +  I 
Sbjct: 43  GYDHFWISQKGLEDTTDEHCIIFYDKEKVELVEGGTFWLFKSPSLPGSMSWGNEIIGSIV 102

Query: 121 TWATFQLKGVELPGFSFQIVNTNMDEFSPRARRRSALLTWQHIASLPPSLPVVY--CG-- 176
               F      L      IVNT MDEFSP        + + H ++L P  P+ Y  C   
Sbjct: 103 FKLCFTFVAQSLDHL---IVNTIMDEFSP------GKVLYLHGSTLHP-YPLAYWLCPVE 152

Query: 177 -GFNTQKESTTGRFLLGRSR----------EHGVVGDMRDAWPSSRVRKNVSLIRTYHGF 225
              + + +     FL  +            EHGV+G+MRDAW S  VRKNVSLI TYH F
Sbjct: 153 VSIHKRNQLLDAFFLEDQVHISFSAWSPILEHGVIGNMRDAWSSFCVRKNVSLICTYHAF 212

Query: 226 KG----EKQGTLEYLK 237
           K     +KQGTL   K
Sbjct: 213 KATFSCDKQGTLNSSK 228