Miyakogusa Predicted Gene

Lj4g3v1983420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1983420.1 tr|I1P547|I1P547_ORYGL Ubiquitin
carboxyl-terminal hydrolase OS=Oryza glaberrima PE=3
SV=1,40.54,1e-17,UCH,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; Cysteine proteinases,NULL; seg,NULL,CUFF.50041.1
         (486 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08200.1                                                       427   e-119
Glyma02g36480.1                                                       121   2e-27

>Glyma17g08200.1 
          Length = 903

 Score =  427 bits (1097), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 273/548 (49%), Positives = 315/548 (57%), Gaps = 78/548 (14%)

Query: 1   MWYTLDDNRVSHVSEREVLNQQAYMLFYVRDRKSIVSRKSLDIVK--------NGIRDSS 52
           MWYTLDDNRVSHVSEREVLNQQAYMLFYVRDRKSIV RK +DI K        N  R+SS
Sbjct: 372 MWYTLDDNRVSHVSEREVLNQQAYMLFYVRDRKSIVPRKPVDIAKKENMKTNLNVNRESS 431

Query: 53  TSNHVSKEYPNGLVEPSLSAETMKNMSNADLLEVSVLKEQKSSVILAESRKQDKKPASEL 112
           TSNHV KEYPNG VE              +  E   L  QK SVILAE+  Q K+  SEL
Sbjct: 432 TSNHVLKEYPNGTVE--------------NKAEKGALVLQKHSVILAENLIQSKRHGSEL 477

Query: 113 SSCAQIKKDSPQGMS----------SVDQSKKDNHVSTDLKCLAAPVVDKTNMCNKNEIL 162
           SS AQ +KDSP G+S          S+D S KD  +  +LK LAAPV  K N+ N+N   
Sbjct: 478 SSEAQAQKDSPDGLSVAKSELGCLSSLDHSGKDYSLPHNLKSLAAPV-GKNNLRNENVFS 536

Query: 163 KDDTKDS--IVP------------DFISQYPEKTFV----TKDAQDXXXXXXXXXXXXXX 204
           K+  KDS  IVP            ++ SQ  +K  V        QD              
Sbjct: 537 KEGIKDSPSIVPSSTNPQNVELTTEWKSQSLKKNLVKIVDVATPQDSSTNMTNGICPKTS 596

Query: 205 XXQPEVNRQAGASATGSMPTKAGIV--ENVVASQALVLNKPVSRSLDMERLXXXXXXXXX 262
               +VN Q G SA GS+  KA  V  E++V SQ LVLNK V+ SL+ E L         
Sbjct: 597 LIHLKVNHQLGTSAIGSVCEKASSVVHEDLVGSQGLVLNKSVNTSLNTESLNQKPLKKSK 656

Query: 263 XXXXXYQASSMHLRPIFLYMTYTGQWXXXXXXXXXXXXLSMKNTYKEKLVKHVR------ 316
                YQ S MHLRPIF YM Y G              LSMKN  K+KL K         
Sbjct: 657 KKFLKYQVSWMHLRPIFYYMAYLGP-RKKNHKRIKRRTLSMKNPNKDKLDKLAFSSEDAK 715

Query: 317 ------VSSCLESKATKAGYR-----KFNDQSPMEI---DTFRKRVDENCALLATPQS-- 360
                 +SSC +SKATKAGYR     K +D+S +E      FRKR+D +CA+LA+     
Sbjct: 716 PDVFPCLSSCSDSKATKAGYRPSANFKSSDESLIETRAEGEFRKRIDHSCAVLASAAQIE 775

Query: 361 --SGCSTVVNQFAATQAYSLQDGKRDQMHNSLMSMLTRGLEETVVARWDDVEIASSRVMD 418
             SG  +VV+QF A QA S QD  RDQMHN LMSM   G EETVVARWDD+E+ SS+ ++
Sbjct: 776 NISGSGSVVSQFEARQADSAQDSTRDQMHNGLMSMPNGGPEETVVARWDDIELPSSQHLE 835

Query: 419 SRNDKIKDIGYVGDEWDEELDKGKRKKLRTFKHSFDGPNIFQEIATEKFKSKRAKLDHSS 478
           S+NDK   IGYVGDEWDEE DKGKRKK+R FKHSF GPN+FQEIA EK K KRAK D S 
Sbjct: 836 SKNDKTVSIGYVGDEWDEEYDKGKRKKIRGFKHSFGGPNLFQEIAVEKSKFKRAKFDQSC 895

Query: 479 SANPPFRI 486
           S NPPFRI
Sbjct: 896 SGNPPFRI 903


>Glyma02g36480.1 
          Length = 434

 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/126 (57%), Positives = 84/126 (66%), Gaps = 22/126 (17%)

Query: 10  VSHVSEREVLNQQAYMLFYVRDRKSIVSRKSLDIVK--------NGIRDSSTSNHVSKEY 61
           VSHVSEREVLNQQAYMLFYVRDRK+IV RK +DI K        NG R+SSTSNHV +EY
Sbjct: 304 VSHVSEREVLNQQAYMLFYVRDRKNIVPRKPVDIAKKENMKTNVNGNRESSTSNHVLQEY 363

Query: 62  PNGLVEPSLSAETMKNMSNADLLEVSVLKEQKSSVILAESRKQDKKPASELSSCAQIKKD 121
           PNG         T++N +  D L +     QK +VILAES  Q K+  SELSS AQ + D
Sbjct: 364 PNG---------TIENKAEKDALVL-----QKHNVILAESLMQSKRHGSELSSKAQAQND 409

Query: 122 SPQGMS 127
           SP G+S
Sbjct: 410 SPDGLS 415