Miyakogusa Predicted Gene

Lj4g3v1957760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1957760.1 Non Chatacterized Hit- tr|G7JGL9|G7JGL9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.22,0,seg,NULL; DDE_4,NULL; UNCHARACTERIZED,Harbinger
transposase-derived nuclease,CUFF.49980.1
         (428 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                       116   5e-26

>Glyma20g23150.2 
          Length = 402

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 36/339 (10%)

Query: 110 AFRMSKPSFLRLVNLLTPSL---ASAF-----PQIAPDCALAAAIFRLAHGAGYNAVSRR 161
            F++S+ +F  + +L+   +   AS F      +++ +  +A A+ RL+ G   + +   
Sbjct: 69  VFKISRKTFNYICSLVEEDMLARASNFVDLNGNRLSLNDQVAVALRRLSSGESLSTIGES 128

Query: 162 FGVTQPEACRAFFAVCKAVTE-SLGHLFELRTDSERVVVGFGWSS---LPNCFG------ 211
           F + Q    +  +   + + E  L HL    T+ E   +   + +   L NC G      
Sbjct: 129 FRMNQSTVSQVTWKFVETMEERGLHHLSWASTEMEMEEIKSKFENIRGLSNCCGAVDSTH 188

Query: 212 -------VLGLARFGIDGEFFGNNGSLIVQALVDSEGRFLDVSAGWPGSMKPETILHQSR 264
                  V  L    +D E    N S+++QA+VD + RF D+  GWPGSM  E +L  S 
Sbjct: 189 IMMTLPSVDALNSVWLDRE---KNCSMVLQAIVDPDLRFRDIVTGWPGSMSDEQVLRSSS 245

Query: 265 LYLGVEESKELLRGPSYKLSDGRLIPQYVLGDSCFPLLPWLLTPYNRVNEEDSFGSAERA 324
            +   EE K  L G    L DG L  +Y++GD+ FPL  WLLTPY    E   F + +  
Sbjct: 246 FFKLAEEGKR-LNGGKKTLPDGTLFREYIIGDTGFPLFSWLLTPY----EGKGFSNVQVE 300

Query: 325 FNGAHSRAMELVGDAFERLRARWQLLSASRRWKQECAEYLPVVIVTGSLLHNFLVKCNEP 384
           FN        +   A  RL+  W+++     WK +    LP +I+   +LHN ++   + 
Sbjct: 301 FNKRVVETQMVAKKALARLKDMWKIIQGV-MWKPD-KHKLPRIILVCCILHNIVIDMEDE 358

Query: 385 MPDKGVNCAEKEADFVD-FDGVVDKNALRIRDALALHLS 422
           +     +C + ++ + D      D  A  +R+ L+L+LS
Sbjct: 359 VLIDMPSCHQHDSRYQDQTSEFADNTATIMREKLSLYLS 397