Miyakogusa Predicted Gene

Lj4g3v1932140.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1932140.1 Non Chatacterized Hit- tr|I1I0I1|I1I0I1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,71.43,2e-18,GB
DEF: VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED
PROTEIN (VPS13),Vacuolar
protei,NODE_46033_length_142_cov_19.838028.path2.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24310.1                                                       115   1e-26

>Glyma13g24310.1 
          Length = 2549

 Score =  115 bits (288), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/56 (92%), Positives = 54/56 (96%)

Query: 1    MASWESIQQILIRHYNRQLLHETYKLFGSAGFIGNPLGFARSIGHGIRDFLSVPAK 56
            MASWESIQ+ILIRHYNRQLLHETYKLFGSAG IGNPLGFARS+G GIRDFLSVPAK
Sbjct: 2161 MASWESIQEILIRHYNRQLLHETYKLFGSAGVIGNPLGFARSMGLGIRDFLSVPAK 2216