Miyakogusa Predicted Gene
- Lj4g3v1909910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1909910.1 Non Chatacterized Hit- tr|I1LNN5|I1LNN5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37392
PE,66.15,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; no
description,Zinc finger, RING/FYVE/PHD-type; no d,CUFF.49955.1
(405 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g00330.1 491 e-139
Glyma14g00670.1 437 e-122
Glyma02g47920.1 432 e-121
Glyma16g18500.1 62 8e-10
Glyma16g18500.2 62 9e-10
Glyma16g05210.1 60 3e-09
Glyma07g19420.1 59 9e-09
Glyma01g41340.1 58 1e-08
Glyma20g00810.1 58 2e-08
Glyma11g04070.1 56 6e-08
Glyma13g23490.1 56 9e-08
Glyma01g41120.1 55 2e-07
Glyma11g04300.1 55 2e-07
Glyma11g04300.2 54 3e-07
Glyma19g30390.1 52 1e-06
Glyma16g06870.1 52 1e-06
Glyma19g24210.1 51 2e-06
Glyma04g15120.1 51 2e-06
>Glyma12g00330.1
Length = 718
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/387 (65%), Positives = 284/387 (73%), Gaps = 33/387 (8%)
Query: 4 QFPCDPQGVCMVCKVVPPDEENLTCNTCATPWHAPCLSSSLPATVAATNDWQCPDCTNLF 63
Q PCD +G CMVCK +P EE L C TC TPWH PCL + P T++AT W CPDC+ +
Sbjct: 5 QLPCDSEGACMVCKGLPGQEERLLCVTCDTPWHVPCLFAP-PPTLSATARWLCPDCS-IL 62
Query: 64 SAPVKSCRDGPDGELVSAILSVKADESLTASQKARKCQQLLAGKSAAVXXXXXXXXXXXX 123
+ V +LV+A+L+V+ D SLT KARK Q+LL GK+ A
Sbjct: 63 DSDVPPVPAPARNQLVAAMLAVENDASLTQHDKARKRQELLTGKAPADDDDDDEQENKS- 121
Query: 124 XXXXXXXXXXXXXXXXMSVSDILTRTLNCSICIQLPERPVTTPCGHSFCLKCFEKWIRQG 183
S+SDIL+R+LNCSICIQLPERPVT+PCGHSFCLKCFEKW+RQG
Sbjct: 122 -----------------SLSDILSRSLNCSICIQLPERPVTSPCGHSFCLKCFEKWVRQG 164
Query: 184 KRTCAKCRQNIPASMASQPRINSALVFAIRMARASKANGGAGAGPS-------------G 230
KR CAKCRQ IPA M SQPRINSALVFAIRMAR + + G+G G
Sbjct: 165 KRNCAKCRQIIPAKMTSQPRINSALVFAIRMARQASNSSGSGRGGVRSVNHFLHNQDRPD 224
Query: 231 EAYTTDRAQRSGRANACSGKIFVTVPTDHFGPILPQNDPLRNQGLLVGESWLDRLECRQW 290
E +TT+RAQRSGRANA SGKIFVTVPTDHFGPI +NDPLRNQGLLVGESW DRLECRQW
Sbjct: 225 EPFTTERAQRSGRANAASGKIFVTVPTDHFGPITAENDPLRNQGLLVGESWRDRLECRQW 284
Query: 291 GAHFVHVGGIAGQSDRGAQSVVLSGGYVDDQDHGEWFLYTGSGGKDLTGNKRTNKNHSFD 350
GAHFV VGGIAGQSDRGAQSVVLSGGYVDD+DHGEWFLYTGSGGKDL+GNKRTNK+HSFD
Sbjct: 285 GAHFVPVGGIAGQSDRGAQSVVLSGGYVDDEDHGEWFLYTGSGGKDLSGNKRTNKSHSFD 344
Query: 351 QKFEKCNRALQLSCLKGYPVRVVRCDK 377
QKFEK NRALQ+SCL+GYPVRVVR K
Sbjct: 345 QKFEKYNRALQVSCLQGYPVRVVRSHK 371
>Glyma14g00670.1
Length = 624
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/386 (57%), Positives = 261/386 (67%), Gaps = 43/386 (11%)
Query: 3 AQFPCDPQGVCMVCKVVPPDEENLTCNTCATPWHAPCLSSSLPATVAATNDWQCPDCTNL 62
AQ PCD GVCM+CK+ P + L+C TCATPWH PCL S P + + W CPDC++
Sbjct: 2 AQLPCDSDGVCMLCKLKPSPSQTLSCGTCATPWHLPCLPS--PPLSLSDSHWDCPDCSDT 59
Query: 63 F-SAPVKSCRDGPDGELVSAILSVKADESLTASQKARKCQQLLAGKSAAVXXXXXXXXXX 121
F PV P LVSAI +++AD SLT QKA K QQLLAG +
Sbjct: 60 FCHHPV-----APTAHLVSAIHAIQADTSLTDQQKAIKRQQLLAGSAHP----------- 103
Query: 122 XXXXXXXXXXXXXXXXXXMSVSDILTRTLNCSICIQLPERPVTTPCGHSFCLKCFEKWIR 181
DI +LNCSIC+QLP+RPVTTPCGH+FCL+CFEKWI
Sbjct: 104 --------------SKDKTKAKDIFDGSLNCSICMQLPDRPVTTPCGHNFCLRCFEKWIG 149
Query: 182 QGKRTCAKCRQNIPASMASQPRINSALVFAIRMARASKANGGAG----------AGPSGE 231
QGKRTCA CR IP MASQPRINS L AIR+A+A+K+ G +G
Sbjct: 150 QGKRTCANCRAQIPTKMASQPRINSQLAMAIRLAKAAKSEGSSGPPKVYHFVRNQDRPDT 209
Query: 232 AYTTDRAQRSGRANACSGKIFVTVPTDHFGPILPQNDPLRNQGLLVGESWLDRLECRQWG 291
A+TT+RA+++G+ANACSGKIFVTVP DHFGPI +NDP RN+G+LVG++W DR+ECRQWG
Sbjct: 210 AFTTERAKKTGKANACSGKIFVTVPPDHFGPIPAENDPTRNRGVLVGDTWEDRMECRQWG 269
Query: 292 AHFVHVGGIAGQSDRGAQSVVLSGGYVDDQDHGEWFLYTGSGGKDLTGNKRTNKNHSFDQ 351
AH HV GIAGQS G+QSV LSGGY DD+DHGEWFLYTGSGG+DL+GNKRTNK SFDQ
Sbjct: 270 AHLPHVAGIAGQSAYGSQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKLQSFDQ 329
Query: 352 KFEKCNRALQLSCLKGYPVRVVRCDK 377
KFE N AL++SC KGYPVRVVR K
Sbjct: 330 KFENMNEALRVSCRKGYPVRVVRSHK 355
>Glyma02g47920.1
Length = 604
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/387 (56%), Positives = 267/387 (68%), Gaps = 44/387 (11%)
Query: 3 AQFPCDPQGVCMVCKVVPPDEENLTCNTCATPWHAPCLSSSLPATVAATNDWQCPDCTNL 62
AQ PCD GVCM+CK P + L+C TCATPWH CL S+ P +++ ++ W CPDC++
Sbjct: 2 AQLPCDSDGVCMLCKQKPSPSQTLSCRTCATPWHLSCLPSA-PLSLSDSH-WDCPDCSDT 59
Query: 63 FS-APVKSCRDGPDGELVSAILSVKADESLTASQKARKCQQLLAGKSAAVXXXXXXXXXX 121
+ PV P +LVSA+ +++AD SLT +KA+K Q+LLAG S +
Sbjct: 60 SNHYPV-----APTADLVSAVHAIQADTSLTDQEKAKKRQELLAGSSDS----------- 103
Query: 122 XXXXXXXXXXXXXXXXXXMSVSDILTRTLNCSICIQLPERPVTTPCGHSFCLKCFEKWIR 181
DI +LNCSIC+QLPERPVTTPCGH+ CL+CFEKW+
Sbjct: 104 --------------SKDKAKTKDIFDGSLNCSICMQLPERPVTTPCGHNLCLRCFEKWVG 149
Query: 182 QGKRTCAKCRQNIPASMASQPRINSALVFAIRMARASKANGGAGAGPS-----------G 230
QGKRTCA CR IPA MASQPRINS L AIR+A+A+K+ G+ P
Sbjct: 150 QGKRTCANCRAQIPAKMASQPRINSQLAMAIRLAKAAKSGEGSSGPPKVYHFVRNQDRPD 209
Query: 231 EAYTTDRAQRSGRANACSGKIFVTVPTDHFGPILPQNDPLRNQGLLVGESWLDRLECRQW 290
A+TT+RA+++G+ANACSGKIFVTVP DHFGPI +NDP+RN+G+LVG++W DR+ECRQW
Sbjct: 210 TAFTTERAKKTGKANACSGKIFVTVPPDHFGPIPSENDPIRNRGVLVGDTWEDRMECRQW 269
Query: 291 GAHFVHVGGIAGQSDRGAQSVVLSGGYVDDQDHGEWFLYTGSGGKDLTGNKRTNKNHSFD 350
GAH HV GIAGQS G+QSV LSGGY DD+DHGEWFLYTGSGG+DL+GNKRTNK SFD
Sbjct: 270 GAHLPHVAGIAGQSGYGSQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKLQSFD 329
Query: 351 QKFEKCNRALQLSCLKGYPVRVVRCDK 377
QKFE N AL++SC KGYPVRVVR K
Sbjct: 330 QKFENMNEALRVSCRKGYPVRVVRSHK 356
>Glyma16g18500.1
Length = 664
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGI----AGQSDRG---AQSVVLSGGYVDDQDHGEW 326
G++VG+ +L R+E G H GI A S G A SV++SGGY DD D GE
Sbjct: 247 GIMVGDLFLFRMELCVVGLHGQIQAGIDFLPASMSSTGEPIATSVIVSGGYEDDMDDGEV 306
Query: 327 FLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+YTG GG++ +++ + QK E N AL+ S G VRV+R
Sbjct: 307 IVYTGHGGQEKNSSRQISH-----QKLESGNLALERSMHYGVEVRVIR 349
>Glyma16g18500.2
Length = 621
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGI----AGQSDRG---AQSVVLSGGYVDDQDHGEW 326
G++VG+ +L R+E G H GI A S G A SV++SGGY DD D GE
Sbjct: 204 GIMVGDLFLFRMELCVVGLHGQIQAGIDFLPASMSSTGEPIATSVIVSGGYEDDMDDGEV 263
Query: 327 FLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+YTG GG++ +++ + QK E N AL+ S G VRV+R
Sbjct: 264 IVYTGHGGQEKNSSRQISH-----QKLESGNLALERSMHYGVEVRVIR 306
>Glyma16g05210.1
Length = 503
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGI--AGQSDRGAQS--------VVLSGGYVDDQDH 323
G+ VG + R E G H + GI GQS A S +V+SG Y DD D+
Sbjct: 33 GIDVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYELPVAVAIVISGMYEDDLDN 92
Query: 324 GEWFLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
E +YTG GG +LTG+KR + DQK E+ N AL+ + PVRV+R
Sbjct: 93 AEDVVYTGQGGHNLTGDKRQFR----DQKLERGNLALKNCSEQCVPVRVIR 139
>Glyma07g19420.1
Length = 709
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGI----AGQSDRG---AQSVVLSGGYVDDQDHGEW 326
G+ +G+ +L R+E G H GI A S G A SV++SGGY DD D G+
Sbjct: 267 GVCIGDVFLYRMELCVVGLHGQPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDV 326
Query: 327 FLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+Y+G GG+D + F QK E N A++ S G VRV+R
Sbjct: 327 IIYSGHGGQD------KHSRQVFHQKLEGGNLAMERSMHYGIEVRVIR 368
>Glyma01g41340.1
Length = 856
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG---AQSVVLSGGYVDDQDHGEWFLYT 330
G+ VG+ + R+E G H GGI G A S+V SG Y DD D+ + +YT
Sbjct: 409 GVEVGDEFQYRVELNIVGLHRQIQGGIDYVKQNGKILATSIVASGAYADDLDNSDGLIYT 468
Query: 331 GSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
G GG + +K DQK E+ N AL+ S + VRV+R
Sbjct: 469 GQGGNVMNTDKEPE-----DQKLERGNLALKNSIEEKNSVRVIR 507
>Glyma20g00810.1
Length = 580
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGI----AGQSDRG---AQSVVLSGGYVDDQDHGEW 326
G+ +G+ +L R+E G H GI A S G A SV++SGGY DD D G+
Sbjct: 122 GVCIGDVFLYRMELCVVGLHGQPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDV 181
Query: 327 FLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+Y+G GG+D + F QK E N A++ S G VRV+R
Sbjct: 182 IIYSGHGGQD------KHSRQVFHQKLEGGNLAMERSMHYGIEVRVIR 223
>Glyma11g04070.1
Length = 749
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG---AQSVVLSGGYVDDQDHGEWFLYT 330
G+ VG+ + R+E G H GGI G A S+V SG Y DD D+ + +YT
Sbjct: 325 GVEVGDEFQYRVELNIVGLHRQIQGGIDYVKHNGKILATSIVASGAYADDLDNPDVLIYT 384
Query: 331 GSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
G GG + +K DQK E+ N AL+ S + VRV+R
Sbjct: 385 GQGGNVMNPDKEPE-----DQKLERGNLALKNSSEEKNSVRVIR 423
>Glyma13g23490.1
Length = 603
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRGAQ-----------SVVLSGGYVDDQD 322
G+ VG + R E G H + GI A +++LSG Y DD D
Sbjct: 131 GIEVGYQFYSRCEMVAVGFHSHWLKGIDYMPKSYANVYTTYEFPVAVAIILSGMYEDDLD 190
Query: 323 HGEWFLYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVRCDK 377
+ + +YTG GG +LTGNKR + DQK E N AL+ + P+RV+R K
Sbjct: 191 NADDVVYTGQGGHNLTGNKRQIR----DQKLEYGNLALKNCVEQCVPIRVIRGHK 241
>Glyma01g41120.1
Length = 487
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG---AQSVVLSGGYVDDQDHGEWFLYT 330
G+ VG+ + R+E G H GGI G A S+V SGGY D + + +YT
Sbjct: 319 GVEVGDEFQYRVELNIIGLHRQIQGGIDYVKHNGKILATSIVASGGYADYLVNSDILVYT 378
Query: 331 GSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
G GG ++ +++ DQK E+ N AL+ S + PVRV+R
Sbjct: 379 GQGGNVMSNDRKPE-----DQKLERGNLALKNSSEEKNPVRVIR 417
>Glyma11g04300.1
Length = 541
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG---AQSVVLSGGYVDDQDHGEWFLYT 330
G+ VG+ + R+E G H GGI G A S+V SGGY D + + +Y+
Sbjct: 335 GVEVGDEFQYRVELNIIGLHLQIQGGIDYVKHNGKILATSIVASGGYADYLVNSDVLVYS 394
Query: 331 GSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
G GG ++ +K+ DQK ++ N AL+ S + PVRV+R
Sbjct: 395 GQGGNVMSNDKKPE-----DQKLKRGNLALKNSSEEKNPVRVIR 433
>Glyma11g04300.2
Length = 530
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG---AQSVVLSGGYVDDQDHGEWFLYT 330
G+ VG+ + R+E G H GGI G A S+V SGGY D + + +Y+
Sbjct: 324 GVEVGDEFQYRVELNIIGLHLQIQGGIDYVKHNGKILATSIVASGGYADYLVNSDVLVYS 383
Query: 331 GSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
G GG ++ +K+ DQK ++ N AL+ S + PVRV+R
Sbjct: 384 GQGGNVMSNDKKPE-----DQKLKRGNLALKNSSEEKNPVRVIR 422
>Glyma19g30390.1
Length = 579
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 274 GLLVGESWLDRLECRQWGAH------FVHVGGIAGQSDRGAQSVVLSGGYVDDQDHGEWF 327
G+ +G+ + R E G H ++G + + + A S+V SGGY D+ + G+
Sbjct: 265 GVEIGDIFFFRFELCLVGLHAPSMAGIDYIGKTSQEEEPLAVSIVSSGGYEDNVEDGDVL 324
Query: 328 LYTGSGGKDLTGNKRTNKNHSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+Y+G GG + +K S DQK E+ N AL+ S +G VRV+R
Sbjct: 325 IYSGQGGVN------RDKGAS-DQKLERGNLALEKSAHRGNEVRVIR 364
>Glyma16g06870.1
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 144 DILTRTLNCSICIQLPERPVTTPCGHSFCLKCFEKWIRQGKRTCAKCRQNI 194
D L L+C+IC+++ P TTPCGHSFC KC + + C KCRQ I
Sbjct: 136 DKLRDELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKKCPKCRQLI 186
>Glyma19g24210.1
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 144 DILTRTLNCSICIQLPERPVTTPCGHSFCLKCFEKWIRQGKRTCAKCRQNI 194
D L L+C+IC+++ P TTPCGHSFC KC + + C KCRQ I
Sbjct: 157 DKLRDELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKKCPKCRQLI 207
>Glyma04g15120.1
Length = 667
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 274 GLLVGESWLDRLECRQWGAHFVHVGGIAGQSDRG-------AQSVVLSGGYVDDQDHGEW 326
G+ +G+ + R+E G H +GGI RG A +V SG Y DD + +
Sbjct: 207 GIEIGDIFYFRMELCIVGLHAPSMGGIDALHIRGEFEEETLAVCIVSSGEYDDDAEDSDV 266
Query: 327 FLYTGSGGKDLTGNKRTNKN-HSFDQKFEKCNRALQLSCLKGYPVRVVR 374
+YTG G GN NK+ H+ DQK ++ N AL S + VRV+R
Sbjct: 267 IIYTGQG-----GNFFMNKDKHTTDQKLQRGNLALDRSSRQHNEVRVIR 310