Miyakogusa Predicted Gene

Lj4g3v1893170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1893170.1 Non Chatacterized Hit- tr|C0PG81|C0PG81_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55.45,3e-19,seg,NULL;
GTP-BINDING PROTEIN 2,Nucleolar GTP-binding protein 2; GTP-BINDING
PROTEIN-RELATED,NULL,CUFF.49927.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35150.1                                                       108   2e-24
Glyma12g35150.2                                                       107   2e-24
Glyma13g35400.1                                                       102   1e-22

>Glyma12g35150.1 
          Length = 554

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 56/59 (94%)

Query: 1   MTAAKMVLHDWQRGKIPFFVPPPQQEDLSEEPIVNGLDVDDGVDSNQASAAIKAIANVL 59
           MTAAKM+LHDWQRG+IPFFVPPP+QEDLSEEP VNG+D+DD VD N+ASAA+KAIA+VL
Sbjct: 443 MTAAKMILHDWQRGRIPFFVPPPRQEDLSEEPNVNGVDLDDSVDGNEASAAMKAIADVL 501


>Glyma12g35150.2 
          Length = 549

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 56/59 (94%)

Query: 1   MTAAKMVLHDWQRGKIPFFVPPPQQEDLSEEPIVNGLDVDDGVDSNQASAAIKAIANVL 59
           MTAAKM+LHDWQRG+IPFFVPPP+QEDLSEEP VNG+D+DD VD N+ASAA+KAIA+VL
Sbjct: 438 MTAAKMILHDWQRGRIPFFVPPPRQEDLSEEPNVNGVDLDDSVDGNEASAAMKAIADVL 496


>Glyma13g35400.1 
          Length = 549

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 54/59 (91%)

Query: 1   MTAAKMVLHDWQRGKIPFFVPPPQQEDLSEEPIVNGLDVDDGVDSNQASAAIKAIANVL 59
           MTAAKM+LHDWQRG+IPFFV PP+ EDLSEEP VNG+D+DD VD N+ASAA+KAIA+VL
Sbjct: 438 MTAAKMILHDWQRGRIPFFVSPPRVEDLSEEPNVNGVDLDDSVDGNEASAAMKAIADVL 496