Miyakogusa Predicted Gene

Lj4g3v1881780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1881780.1 Non Chatacterized Hit- tr|D8RTY6|D8RTY6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.66,1e-17,SNAPc_SNAP43,Small nuclear RNA activating complex
(SNAPc), subunit SNAP43; SMALL NUCLEAR RNA ACTIVAT,CUFF.49907.1
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g22870.2                                                       325   4e-89
Glyma13g22870.1                                                       325   4e-89

>Glyma13g22870.2 
          Length = 274

 Score =  325 bits (832), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 165/273 (60%), Positives = 193/273 (70%), Gaps = 1/273 (0%)

Query: 1   MNIDYFKKDIDELIGQFAQDESTTLADMKRVWLSKKFSYIYEAFPSTNLAFFMQSLYAHS 60
           M+IDYFK+DIDELIG+F QDESTTLA++KRVWLS+KFSYIYEA PS NLAFFMQSLYAH 
Sbjct: 1   MSIDYFKQDIDELIGEFTQDESTTLAEIKRVWLSRKFSYIYEARPSANLAFFMQSLYAHC 60

Query: 61  IGYMVGAGSLSVRXXXXXXXXXXXETQPFKPPFKIYLSLGELKKVRILXXXXXXXXXXXX 120
           IGYMVG  +LS R           ETQPF P FK+YLSLGELKK+RIL            
Sbjct: 61  IGYMVGTATLSHRLGGLYCLYCLYETQPFNPSFKVYLSLGELKKLRILVADAKANDIKVA 120

Query: 121 XXXXXRMLERNMFLFGAVDLAEGAVTETVXXXXXXXNASIRVAYETLFKNTPINDYIHMD 180
                RMLERN FLFG+VDL EG VTETV       NA I+VAYE LF +T I++YI MD
Sbjct: 121 LALVKRMLERNTFLFGSVDLMEGCVTETVNELQQLQNARIQVAYEKLFDSTSIDNYIQMD 180

Query: 181 LGMEVDLNNLKKISSEYAEAKHLAAKEASSILDAENIKRIAGNKELMLGDVFEEIANDWV 240
           LG+EVDL+ LKK SS YA AK++A +EAS+ILD ENIK +  +KEL +GDV E++ANDW 
Sbjct: 181 LGLEVDLDLLKKKSSGYATAKNVAIQEASNILDVENIKHLQKDKEL-IGDVVEKVANDWH 239

Query: 241 IQKQAFYKQTGLGEEVAYXXXXXXXXXXDRHDG 273
           +QKQ FYKQTGLG++               HDG
Sbjct: 240 VQKQTFYKQTGLGDDAYEKELEQLLLEQHPHDG 272


>Glyma13g22870.1 
          Length = 274

 Score =  325 bits (832), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 165/273 (60%), Positives = 193/273 (70%), Gaps = 1/273 (0%)

Query: 1   MNIDYFKKDIDELIGQFAQDESTTLADMKRVWLSKKFSYIYEAFPSTNLAFFMQSLYAHS 60
           M+IDYFK+DIDELIG+F QDESTTLA++KRVWLS+KFSYIYEA PS NLAFFMQSLYAH 
Sbjct: 1   MSIDYFKQDIDELIGEFTQDESTTLAEIKRVWLSRKFSYIYEARPSANLAFFMQSLYAHC 60

Query: 61  IGYMVGAGSLSVRXXXXXXXXXXXETQPFKPPFKIYLSLGELKKVRILXXXXXXXXXXXX 120
           IGYMVG  +LS R           ETQPF P FK+YLSLGELKK+RIL            
Sbjct: 61  IGYMVGTATLSHRLGGLYCLYCLYETQPFNPSFKVYLSLGELKKLRILVADAKANDIKVA 120

Query: 121 XXXXXRMLERNMFLFGAVDLAEGAVTETVXXXXXXXNASIRVAYETLFKNTPINDYIHMD 180
                RMLERN FLFG+VDL EG VTETV       NA I+VAYE LF +T I++YI MD
Sbjct: 121 LALVKRMLERNTFLFGSVDLMEGCVTETVNELQQLQNARIQVAYEKLFDSTSIDNYIQMD 180

Query: 181 LGMEVDLNNLKKISSEYAEAKHLAAKEASSILDAENIKRIAGNKELMLGDVFEEIANDWV 240
           LG+EVDL+ LKK SS YA AK++A +EAS+ILD ENIK +  +KEL +GDV E++ANDW 
Sbjct: 181 LGLEVDLDLLKKKSSGYATAKNVAIQEASNILDVENIKHLQKDKEL-IGDVVEKVANDWH 239

Query: 241 IQKQAFYKQTGLGEEVAYXXXXXXXXXXDRHDG 273
           +QKQ FYKQTGLG++               HDG
Sbjct: 240 VQKQTFYKQTGLGDDAYEKELEQLLLEQHPHDG 272