Miyakogusa Predicted Gene

Lj4g3v1880950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880950.1 tr|F2E072|F2E072_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,57.69,0.000000000000002,seg,NULL,CUFF.49860.1
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g30340.4                                                       228   4e-60
Glyma06g30340.1                                                       223   1e-58
Glyma18g22150.1                                                       204   5e-53
Glyma17g12190.1                                                       189   2e-48
Glyma06g30340.2                                                       175   3e-44
Glyma06g30340.3                                                       169   2e-42
Glyma13g22630.1                                                       161   6e-40

>Glyma06g30340.4 
          Length = 229

 Score =  228 bits (581), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/237 (54%), Positives = 148/237 (62%), Gaps = 14/237 (5%)

Query: 1   MATNILSTANPFXXXXXXXXXXXXXXXXXATLTHVHHH--IKCSVKRQLTLCKAVNQTAL 58
           MATNILST+NPF                  T T+V+++  +KC+VKR+LTLCKA NQ A 
Sbjct: 1   MATNILSTSNPFLLTNSFSSSSF------VTPTYVYYNPIMKCTVKRELTLCKAANQPAP 54

Query: 59  P----TLTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 114
           P     +TKR LSISF TSFVLSLA K                                Q
Sbjct: 55  PHSPIVVTKRGLSISFITSFVLSLASK--KNANAAILEADDDEELLEKVKRDRKKRLEKQ 112

Query: 115 GVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLSS 174
           GVISSS +ETGYLQD+VYKLS VGQA+E NDLS AGSV G   D DWVQ+ANIA NKLSS
Sbjct: 113 GVISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSS 172

Query: 175 SPEEKSEADTFXXXXXXXXXXXXQKDVESSKLAFVSSASAFEKWTSLTGLVAQLKGL 231
           SPEEK+E D+F            + DVESSK+AFVSSA+AFEKWTS+TGL AQLKGL
Sbjct: 173 SPEEKTEVDSFNSSLASLISSVSKNDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL 229


>Glyma06g30340.1 
          Length = 230

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/238 (54%), Positives = 148/238 (62%), Gaps = 15/238 (6%)

Query: 1   MATNILSTANPFXXXXXXXXXXXXXXXXXATLTHVHHH--IKCSVKRQLTLCKAVNQTAL 58
           MATNILST+NPF                  T T+V+++  +KC+VKR+LTLCKA NQ A 
Sbjct: 1   MATNILSTSNPFLLTNSFSSSSF------VTPTYVYYNPIMKCTVKRELTLCKAANQPAP 54

Query: 59  P----TLTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 114
           P     +TKR LSISF TSFVLSLA K                                Q
Sbjct: 55  PHSPIVVTKRGLSISFITSFVLSLASK--KNANAAILEADDDEELLEKVKRDRKKRLEKQ 112

Query: 115 GVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLSS 174
           GVISSS +ETGYLQD+VYKLS VGQA+E NDLS AGSV G   D DWVQ+ANIA NKLSS
Sbjct: 113 GVISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSS 172

Query: 175 SPEEKSEADTFXXXXXXXXXXXXQK-DVESSKLAFVSSASAFEKWTSLTGLVAQLKGL 231
           SPEEK+E D+F             K DVESSK+AFVSSA+AFEKWTS+TGL AQLKGL
Sbjct: 173 SPEEKTEVDSFNSSLASLISSAVSKNDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL 230


>Glyma18g22150.1 
          Length = 258

 Score =  204 bits (520), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/233 (52%), Positives = 138/233 (59%), Gaps = 8/233 (3%)

Query: 1   MATNILSTANPFXXXXXXXXXXXXXXXXXATLTHVHHH--IKCSVKRQLTLCKAVNQTAL 58
           MA NILST+NP                      HV  +  IK + KR+LTLCKA   + +
Sbjct: 32  MAKNILSTSNPILLPSSSPSSSSSSFVKP---IHVCSNPIIKSTSKRELTLCKATPHSPI 88

Query: 59  PTLTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVIS 118
             +TKR LSISF TSFVLSLAGK                                QGVIS
Sbjct: 89  -VVTKRGLSISFITSFVLSLAGK--KNANAAILEADDDEELLEKVKRDRKKRLEKQGVIS 145

Query: 119 SSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLSSSPEE 178
           SS +ETGYLQD+VYKLS VGQA+E NDLS AGSV G   D DWVQ+ANIA NKLSSS EE
Sbjct: 146 SSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANIAFNKLSSSSEE 205

Query: 179 KSEADTFXXXXXXXXXXXXQKDVESSKLAFVSSASAFEKWTSLTGLVAQLKGL 231
           K+E D F            +KDVESSK+AFVSSA+AFEKWTS+TGL AQLKGL
Sbjct: 206 KTEVDAFNSSLASLISSVSKKDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL 258


>Glyma17g12190.1 
          Length = 188

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/196 (55%), Positives = 122/196 (62%), Gaps = 16/196 (8%)

Query: 39  IKCSVKRQLTLCKAVNQTAL-PT--LTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXX 95
           I CSVKRQLTLCKAV+Q A+ P   LTKR LSISF T+F LSLAG+              
Sbjct: 6   IMCSVKRQLTLCKAVSQPAIHPPIILTKRGLSISFPTTFSLSLAGEDANAAILDADDDEE 65

Query: 96  XXXXXXXXXXXXXXXXXXQGVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGR 155
                                     +  GYLQD+VYKLSEVG+AIENNDL+TA SVFG 
Sbjct: 66  LLEKVKRDRKKRL-------------ERQGYLQDLVYKLSEVGKAIENNDLATAASVFGS 112

Query: 156 GKDTDWVQKANIALNKLSSSPEEKSEADTFXXXXXXXXXXXXQKDVESSKLAFVSSASAF 215
           G DTDWVQ AN+AL+KLS+SPEEK+  DTF              DVESSKLAFVSSASAF
Sbjct: 113 GTDTDWVQNANVALDKLSASPEEKTVVDTFNSSLASLISSVAANDVESSKLAFVSSASAF 172

Query: 216 EKWTSLTGLVAQLKGL 231
           E+W+SLTGL  QLKG 
Sbjct: 173 EEWSSLTGLAVQLKGF 188


>Glyma06g30340.2 
          Length = 195

 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/191 (52%), Positives = 116/191 (60%), Gaps = 14/191 (7%)

Query: 1   MATNILSTANPFXXXXXXXXXXXXXXXXXATLTHVHHH--IKCSVKRQLTLCKAVNQTAL 58
           MATNILST+NPF                  T T+V+++  +KC+VKR+LTLCKA NQ A 
Sbjct: 1   MATNILSTSNPFLLTNSFSSSSF------VTPTYVYYNPIMKCTVKRELTLCKAANQPAP 54

Query: 59  P----TLTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 114
           P     +TKR LSISF TSFVLSLA K                                Q
Sbjct: 55  PHSPIVVTKRGLSISFITSFVLSLASK--KNANAAILEADDDEELLEKVKRDRKKRLEKQ 112

Query: 115 GVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLSS 174
           GVISSS +ETGYLQD+VYKLS VGQA+E NDLS AGSV G   D DWVQ+ANIA NKLSS
Sbjct: 113 GVISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSS 172

Query: 175 SPEEKSEADTF 185
           SPEEK+E D+F
Sbjct: 173 SPEEKTEVDSF 183


>Glyma06g30340.3 
          Length = 204

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/187 (52%), Positives = 113/187 (60%), Gaps = 14/187 (7%)

Query: 1   MATNILSTANPFXXXXXXXXXXXXXXXXXATLTHVHHH--IKCSVKRQLTLCKAVNQTAL 58
           MATNILST+NPF                  T T+V+++  +KC+VKR+LTLCKA NQ A 
Sbjct: 1   MATNILSTSNPFLLTNSFSSSSF------VTPTYVYYNPIMKCTVKRELTLCKAANQPAP 54

Query: 59  P----TLTKRDLSISFFTSFVLSLAGKGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 114
           P     +TKR LSISF TSFVLSLA K                                Q
Sbjct: 55  PHSPIVVTKRGLSISFITSFVLSLASK--KNANAAILEADDDEELLEKVKRDRKKRLEKQ 112

Query: 115 GVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLSS 174
           GVISSS +ETGYLQD+VYKLS VGQA+E NDLS AGSV G   D DWVQ+ANIA NKLSS
Sbjct: 113 GVISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSS 172

Query: 175 SPEEKSE 181
           SPEEK+E
Sbjct: 173 SPEEKTE 179


>Glyma13g22630.1 
          Length = 169

 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 93/123 (75%), Gaps = 5/123 (4%)

Query: 114 QGVISSSTKETGYLQDVVYKLSEVGQAIENNDLSTAGSVFGRGKDTDWVQKANIALNKLS 173
           QGVI SSTKETGYLQD+VYKLS+VG+AIEN+DLSTA SVFG G DTDWVQ ANI+LNK+ 
Sbjct: 47  QGVIKSSTKETGYLQDLVYKLSKVGKAIENSDLSTAASVFGSGTDTDWVQNANISLNKVR 106

Query: 174 S-----SPEEKSEADTFXXXXXXXXXXXXQKDVESSKLAFVSSASAFEKWTSLTGLVAQL 228
           S     S EEK+  DTF             KDVESSKLAFVSS SAFEKW+SL GLV QL
Sbjct: 107 SYRYYASAEEKTAVDTFNSSLASLISSVAGKDVESSKLAFVSSVSAFEKWSSLMGLVVQL 166

Query: 229 KGL 231
           KGL
Sbjct: 167 KGL 169