Miyakogusa Predicted Gene

Lj4g3v1880730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880730.1 tr|B9HAJ3|B9HAJ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_819088 PE=4
SV=1,46.27,3e-19,seg,NULL,CUFF.49825.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g23470.1                                                       135   4e-32
Glyma17g12240.2                                                       125   4e-29
Glyma17g12240.1                                                       124   5e-29
Glyma08g22660.1                                                        90   2e-18
Glyma07g03430.1                                                        75   4e-14
Glyma15g01060.1                                                        54   1e-07
Glyma13g44210.2                                                        54   1e-07
Glyma13g44210.1                                                        54   1e-07

>Glyma13g23470.1 
          Length = 257

 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 108/191 (56%), Gaps = 47/191 (24%)

Query: 1   MLLQSSSTPIMNSFLPHSKDPSTEPEHLHRIPRTRSVTLSGSWS---PIEGRRSRMTRAL 57
           MLL+SSSTPI+NS +PH KD   EPE LHR PRTRS+TLS S S   P+E   SRMTRAL
Sbjct: 6   MLLRSSSTPILNSRIPHPKDSPHEPEILHRSPRTRSLTLSASSSSLSPVEASPSRMTRAL 65

Query: 58  SETDLTAAPKRKPPSHGLFDEDEGKASTLAARSRTTSLGPALFSFSELEEGVSGIGVRDE 117
           SETDL+A                        RS+T+S G ALFSF+E +EG    G    
Sbjct: 66  SETDLSA------------------------RSKTSSFGSALFSFTESDEGDGVGGGGGG 101

Query: 118 GLLASRVLVEXXXXXXXXXXXXXXXXXXXXXXFWDKNHGSDSTDLYYRTMIEANPGNPLF 177
               +                           FWD N+G+DSTDLYYRTMIEANPGNPLF
Sbjct: 102 DGWDNGDGGG--------------------SGFWDSNNGNDSTDLYYRTMIEANPGNPLF 141

Query: 178 LSNYARYLKEV 188
           L NYARYLKEV
Sbjct: 142 LGNYARYLKEV 152


>Glyma17g12240.2 
          Length = 213

 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/192 (47%), Positives = 102/192 (53%), Gaps = 45/192 (23%)

Query: 1   MLLQSSSTPIMNSFLPHS----KDPSTEPEHLHRIPRTRSVTLSGSWSPIEGRRSRMTRA 56
           MLL+SSSTPI+NS +PHS    KD   EPE LHR PRTRS+TLS S        SRMTRA
Sbjct: 6   MLLRSSSTPILNSRIPHSNLNPKDSPHEPEILHRSPRTRSLTLSAS--LSSLSPSRMTRA 63

Query: 57  LSETDLTAAPKRKPPSHGLFDEDEGKASTLAARSRTTSLGPALFSFSELEEGVSGIGVRD 116
           LSETDL+A                        RS+T S G ALFSF E ++G   +    
Sbjct: 64  LSETDLSA------------------------RSKTASFGSALFSFYESDDGDVAVVEGG 99

Query: 117 EGLLASRVLVEXXXXXXXXXXXXXXXXXXXXXXFWDKNHGSDSTDLYYRTMIEANPGNPL 176
                                            FWD N+G+DSTDLYYRTMIEANPGNPL
Sbjct: 100 GVGGGGGGWDN---------------GDGGGSGFWDSNNGNDSTDLYYRTMIEANPGNPL 144

Query: 177 FLSNYARYLKEV 188
           FL NYARYLKEV
Sbjct: 145 FLGNYARYLKEV 156


>Glyma17g12240.1 
          Length = 261

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/192 (47%), Positives = 102/192 (53%), Gaps = 45/192 (23%)

Query: 1   MLLQSSSTPIMNSFLPHS----KDPSTEPEHLHRIPRTRSVTLSGSWSPIEGRRSRMTRA 56
           MLL+SSSTPI+NS +PHS    KD   EPE LHR PRTRS+TLS S        SRMTRA
Sbjct: 6   MLLRSSSTPILNSRIPHSNLNPKDSPHEPEILHRSPRTRSLTLSAS--LSSLSPSRMTRA 63

Query: 57  LSETDLTAAPKRKPPSHGLFDEDEGKASTLAARSRTTSLGPALFSFSELEEGVSGIGVRD 116
           LSETDL+A                        RS+T S G ALFSF E ++G   +    
Sbjct: 64  LSETDLSA------------------------RSKTASFGSALFSFYESDDGDVAVVEGG 99

Query: 117 EGLLASRVLVEXXXXXXXXXXXXXXXXXXXXXXFWDKNHGSDSTDLYYRTMIEANPGNPL 176
                                            FWD N+G+DSTDLYYRTMIEANPGNPL
Sbjct: 100 GVGGGGGGWDN---------------GDGGGSGFWDSNNGNDSTDLYYRTMIEANPGNPL 144

Query: 177 FLSNYARYLKEV 188
           FL NYARYLKEV
Sbjct: 145 FLGNYARYLKEV 156


>Glyma08g22660.1 
          Length = 315

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 1   MLLQSSSTPIMNSFLPHSKDPSTEPEHLHRIPRTRS-VTLSGSWSPIEGRRSRMTRALSE 59
           MLL+SSS PI+ S L +SK+ S+EPEH+  +P+T S ++LS +   I+ ++S   +  + 
Sbjct: 1   MLLRSSSAPILTSLLHYSKESSSEPEHILNLPKTASALSLSQNLVEIDLKKSSSPKRKNR 60

Query: 60  TDLTAAPKRKPPSHGLFDEDEGKASTLAARSRTTSLGPALFSFSELEEGV-----SGIGV 114
             L++ PK +  S  + + DEGK        +  S    LFS  +L++G+      G G 
Sbjct: 61  VPLSSVPKNQ-QSKKIKERDEGKDPQQKTCMKAKSSIQELFSSLDLDKGLLDHEERGSGK 119

Query: 115 RDEGLLAS------RVLVEXXXXXXXXXXXXXXXXXXXXXXFWDKN-HGSDSTDLYYRTM 167
           +D  L  S                                 F + N HG D T+ YY+ M
Sbjct: 120 KDSWLQTSVMGGGMGSDGGWICGGCNGSGRGSGGGHGKRWGFHEGNDHGRDRTEAYYQNM 179

Query: 168 IEANPGNPLFLSNYARYLKEVCEE 191
           IEANP + L L NYA++LKEVC++
Sbjct: 180 IEANPSDALLLGNYAKFLKEVCDD 203


>Glyma07g03430.1 
          Length = 268

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 85/192 (44%), Gaps = 37/192 (19%)

Query: 1   MLLQSSSTPIMNSFLPHSKDPSTEPEHLHRIPRTRSVTLSGSWSPIEGRRSRMTRALSET 60
           MLL+SSS PI+ S L +SK+  +EPEH+  +P+T S             +  +    S  
Sbjct: 1   MLLRSSSAPILTSLLFYSKEFPSEPEHILHLPKTASALSLSQ----SLSKPSILELFSSF 56

Query: 61  DLTAAPKRKPPSHGLFDEDEGKASTLAARSRTTSLGPALFS-FSELEEGVSGIGVRDEGL 119
           DL           G+ D +E  A    +  +T+ +G  + S    +  G +G G   +G 
Sbjct: 57  DLDK---------GVLDHEECGAGKKDSWLQTSVMGAGMGSDGGWICGGCNGSGRGSDGG 107

Query: 120 LASRVLVEXXXXXXXXXXXXXXXXXXXXXXFWDKNHGSDSTDLYYRTMIEANPGNPLFLS 179
              R   +                          +HG D TD YY+ MIEANP + L L 
Sbjct: 108 HGRRWGFDEG-----------------------NDHGRDRTDAYYQNMIEANPSDALLLG 144

Query: 180 NYARYLKEVCEE 191
           NYA++LKEVCE+
Sbjct: 145 NYAKFLKEVCED 156


>Glyma15g01060.1 
          Length = 282

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 26/34 (76%)

Query: 155 HGSDSTDLYYRTMIEANPGNPLFLSNYARYLKEV 188
           HG D TD YY+ MI+ANP N L L NYA++LKEV
Sbjct: 137 HGRDGTDAYYQNMIQANPNNALLLGNYAKFLKEV 170


>Glyma13g44210.2 
          Length = 202

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 26/34 (76%)

Query: 155 HGSDSTDLYYRTMIEANPGNPLFLSNYARYLKEV 188
           HG D TD YY+ MI+ANP N L L NYA++LKEV
Sbjct: 112 HGRDGTDAYYQNMIQANPNNALLLGNYAKFLKEV 145


>Glyma13g44210.1 
          Length = 257

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 26/34 (76%)

Query: 155 HGSDSTDLYYRTMIEANPGNPLFLSNYARYLKEV 188
           HG D TD YY+ MI+ANP N L L NYA++LKEV
Sbjct: 112 HGRDGTDAYYQNMIQANPNNALLLGNYAKFLKEV 145