Miyakogusa Predicted Gene
- Lj4g3v1880330.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1880330.1 Non Chatacterized Hit- tr|I3S3A7|I3S3A7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR
1-RELATED,NULL;
coiled-coil,,NODE_11622_length_1004_cov_110.343628.path1.1
(224 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g23580.1 384 e-107
Glyma17g12340.1 376 e-104
Glyma04g19450.1 323 1e-88
Glyma06g07260.1 209 2e-54
Glyma04g07160.1 206 2e-53
Glyma20g26490.1 184 9e-47
Glyma03g03820.1 164 5e-41
Glyma01g33170.1 162 2e-40
Glyma10g40820.1 154 9e-38
Glyma13g05570.1 140 1e-33
>Glyma13g23580.1
Length = 284
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/225 (87%), Positives = 201/225 (89%), Gaps = 1/225 (0%)
Query: 1 MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
MSKEE+DFRNLLENELD YIIRLKELQDRVAKVK SSE+MMKI KEIVD
Sbjct: 60 MSKEESDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDRVAKVKDSSEEMMKIHKEIVD 119
Query: 61 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFF TDLLYKLVKEC
Sbjct: 120 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFITDLLYKLVKEC 179
Query: 121 ETMLDYLFPAIDLA-ASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKST 179
ETMLD LFP D A S ETTPQAE FDPSTSTTTKSDGLLIPKELAEIEYMESLYMKST
Sbjct: 180 ETMLDRLFPVNDPAPVSSETTPQAEGFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKST 239
Query: 180 VSALNVLQEIRSGSSTVSMFSLPPLQLSGVEETWKKIPVLEQTAK 224
VSAL+VLQEIRSGSSTVSMFSLPPL++SG EETWKKIPVLEQTAK
Sbjct: 240 VSALHVLQEIRSGSSTVSMFSLPPLKISGSEETWKKIPVLEQTAK 284
>Glyma17g12340.1
Length = 295
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/226 (84%), Positives = 200/226 (88%), Gaps = 2/226 (0%)
Query: 1 MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
MSKEE+DFRNLLENELD YIIRLKELQD VA+VK S E+MMKI KEIVD
Sbjct: 70 MSKEESDFRNLLENELDKFNTFFVEKEEEYIIRLKELQDSVAQVKGSREEMMKIHKEIVD 129
Query: 61 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC
Sbjct: 130 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 189
Query: 121 ETMLDYLFPAIDLA-ASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKST 179
ETMLD+LFP D A S ETTPQAE FDPSTSTTTKSDGL+IPKELAEIEYMESLYMKST
Sbjct: 190 ETMLDHLFPVNDPAPVSTETTPQAEGFDPSTSTTTKSDGLVIPKELAEIEYMESLYMKST 249
Query: 180 VSALNVLQEIRSGSSTVSMFSLPPLQLSGV-EETWKKIPVLEQTAK 224
VSAL+VLQEIRSGSSTVSMFSLPPL++SG EETWKKIPVLEQ AK
Sbjct: 250 VSALHVLQEIRSGSSTVSMFSLPPLKISGSEEETWKKIPVLEQAAK 295
>Glyma04g19450.1
Length = 286
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/227 (74%), Positives = 188/227 (82%), Gaps = 3/227 (1%)
Query: 1 MSKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVD 60
MSKEETDFRN +E EL II+LKELQDRVAKVK S+EQ+M+IRKEIVD
Sbjct: 60 MSKEETDFRNSIEQELHKFNTFFVEKEEECIIKLKELQDRVAKVKNSNEQLMQIRKEIVD 119
Query: 61 FHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 120
FHGEMVLLENYSALNY GLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC
Sbjct: 120 FHGEMVLLENYSALNYIGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKEC 179
Query: 121 ETMLDYLFPAIDLAASGETTPQAE--VFDPSTSTTTKSDGLLIPKELAEI-EYMESLYMK 177
ETML++LFP D + SGE PQAE ++++T SD LL+PKELA ++ESLYMK
Sbjct: 180 ETMLNHLFPVNDPSTSGEAPPQAEEGCDASTSTSTKSSDDLLMPKELAAANHHIESLYMK 239
Query: 178 STVSALNVLQEIRSGSSTVSMFSLPPLQLSGVEETWKKIPVLEQTAK 224
ST+SAL+VLQEIR GSSTVSMFSLPPLQ+SG+EETW KIP+LEQTAK
Sbjct: 240 STISALHVLQEIRKGSSTVSMFSLPPLQISGLEETWNKIPILEQTAK 286
>Glyma06g07260.1
Length = 250
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 142/204 (69%), Gaps = 2/204 (0%)
Query: 2 SKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVDF 61
+ E F LLE E+D YII+ KELQDRVA+ S+ ++M + + IVDF
Sbjct: 48 ADELNHFLRLLELEIDKFNAFFVDKEEEYIIKWKELQDRVARAIGSNLELMSLGRGIVDF 107
Query: 62 HGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECE 121
HGEMVLLENY+ALNYTGLVKI+KKYDKRTGAL+RLPFIQ+VL QPFF D+L KLVKECE
Sbjct: 108 HGEMVLLENYTALNYTGLVKIIKKYDKRTGALLRLPFIQEVLNQPFFKIDVLNKLVKECE 167
Query: 122 TMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVS 181
+L LF + SG+ + + + +T +K+ + +PKELAEIE ME+ + K T+S
Sbjct: 168 VILSILFNNDWPSISGDF--EEDEYGSTTGNESKATLMHVPKELAEIENMENTFTKLTLS 225
Query: 182 ALNVLQEIRSGSSTVSMFSLPPLQ 205
AL L+EIR SSTVS+FSLPPL
Sbjct: 226 ALRSLEEIRGRSSTVSIFSLPPLH 249
>Glyma04g07160.1
Length = 250
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 2 SKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVDF 61
+ E F LLE E+D YII+ KELQDRVA+ S+ ++M + +EIVDF
Sbjct: 48 ADELNHFLGLLELEIDKFNGFFVDKEEEYIIKWKELQDRVARAIDSNAELMSLGREIVDF 107
Query: 62 HGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECE 121
HGEMVLLENY+ALNYTGLVKI+KKYDKRTGAL+RLPFIQ+VL QPFF D+L KLVKECE
Sbjct: 108 HGEMVLLENYTALNYTGLVKIIKKYDKRTGALLRLPFIQEVLNQPFFKIDVLNKLVKECE 167
Query: 122 TMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLL-IPKELAEIEYMESLYMKSTV 180
+L LF D ++ E + E S S + L+ +PKEL EIE ME+ + K T+
Sbjct: 168 VILSILFTN-DWSSISEDFEEDEC--GSMSGNENKETLMHVPKELDEIENMENTFTKLTL 224
Query: 181 SALNVLQEIRSGSSTVSMFSLPPLQ 205
SAL L+EIR SSTVS+FSLPPL
Sbjct: 225 SALRSLEEIRGRSSTVSIFSLPPLH 249
>Glyma20g26490.1
Length = 270
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 136/204 (66%), Gaps = 3/204 (1%)
Query: 2 SKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVDF 61
+KE F NLL+ E+ Y+I+LKE QDRV + S+ +M + +EIVDF
Sbjct: 48 AKELDHFLNLLQLEIAKFNNFFVDKEEEYVIKLKEFQDRVVEAVDSNVDLMSLGREIVDF 107
Query: 62 HGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECE 121
HGEMVLLENYSALNYTGLVKI+KK+DK+TGAL+R PFIQ V+ QPF+ D+L KLVKECE
Sbjct: 108 HGEMVLLENYSALNYTGLVKIIKKHDKKTGALLRSPFIQSVVNQPFYEIDVLNKLVKECE 167
Query: 122 TMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVS 181
+L LF ++ + Q F + K + +P+EL+EI+ M+++Y++ T+S
Sbjct: 168 VILSILFTNGPSSSISQDFMQNG-FGSMSGNENKETVMQVPEELSEIKNMKNMYIQLTLS 226
Query: 182 ALNVLQEIRSGSSTVSMFSLPPLQ 205
AL+ L++IR SSTVSMF P LQ
Sbjct: 227 ALHTLEQIRGRSSTVSMF--PSLQ 248
>Glyma03g03820.1
Length = 197
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 120/192 (62%), Gaps = 39/192 (20%)
Query: 30 YIIR--LKELQDRVAKV-------------KASSEQMMKIRKEIVDFHGEMVLLENYSAL 74
+IIR ++E+Q R+ +V + E+M KIRK IVDFHGEMVLL NYS +
Sbjct: 11 FIIRCLVQEVQQRIKRVVDVWGPSGSQPSEEDYREEMAKIRKTIVDFHGEMVLLVNYSNI 70
Query: 75 NYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDYLFPAIDLA 134
NYTGL KILKKYDKRTG L+RLPFIQKVL+QPFFTTDL+ KLVKECE+++D +FPA + A
Sbjct: 71 NYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPAEEEA 130
Query: 135 ASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVSALNVLQEIRSGSS 194
+ A T +G+ ++TV+AL +QEIR GSS
Sbjct: 131 ERAKEAKDA--------ITVAGEGIF----------------RNTVAALLTMQEIRKGSS 166
Query: 195 TVSMFSLPPLQL 206
T S FSLPPL L
Sbjct: 167 TESPFSLPPLNL 178
>Glyma01g33170.1
Length = 283
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 107/163 (65%), Gaps = 24/163 (14%)
Query: 44 VKASSEQMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVL 103
+K E+M KIRK IVDFHGEMVLL NYS +NYTGL KILKKYDKRTG L+RLPFIQKVL
Sbjct: 127 IKDYKEEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVL 186
Query: 104 QQPFFTTDLLYKLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPK 163
+QPFFTTDL+ KLVKECE+++D +FPA + A + + T G+
Sbjct: 187 EQPFFTTDLISKLVKECESIIDAVFPAEEEAERAKEA--------KEAITVAGKGIF--- 235
Query: 164 ELAEIEYMESLYMKSTVSALNVLQEIRSGSSTVSMFSLPPLQL 206
++TV+AL LQEIR GSST S FSLPPL L
Sbjct: 236 -------------RNTVAALLTLQEIRKGSSTESPFSLPPLNL 265
>Glyma10g40820.1
Length = 289
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 40/241 (16%)
Query: 2 SKEETDFRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASSEQMMKIRKEIVDF 61
+ E F LL+ E+D Y+I+ +ELQDRV + S+ +M + E VDF
Sbjct: 48 ANELNHFLTLLQLEIDKFNNFFIDKEEEYVIKWRELQDRVVEAVNSNVDLMSLGTETVDF 107
Query: 62 HGEMVLLENYSALNYTG---------------------------------------LVKI 82
HGEMVLLENYSALNYTG LVKI
Sbjct: 108 HGEMVLLENYSALNYTGIEVSWMSLIGIYFQCESFLTIVYQLIRIGNTFLCSFYKSLVKI 167
Query: 83 LKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDYLFPAIDLAASGETTPQ 142
+KK+DK+TGAL+R PFIQ V++QPF+ D L KLVKECE +L LF ++ + Q
Sbjct: 168 IKKHDKKTGALLRSPFIQAVVKQPFYEIDALNKLVKECEVILSILFNNGPSSSISQDFMQ 227
Query: 143 AEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVSALNVLQEIRSGSSTVSMFSLP 202
F + K + +P+EL+EI+ M+++Y++ T++AL+ L++IR SST+SMF
Sbjct: 228 NG-FGSMSDKENKETVMQVPEELSEIKNMKNMYIELTLTALHTLEQIRGRSSTLSMFPSS 286
Query: 203 P 203
P
Sbjct: 287 P 287
>Glyma13g05570.1
Length = 311
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 20/208 (9%)
Query: 8 FRNLLENELDXXXXXXXXXXXXYIIRLKELQDRVAKVKASS-------------EQMMKI 54
F +L EL+ ++IR +EL++R+ +K S E+MM I
Sbjct: 68 FVRILNEELEKFNDFYVDKEEEFVIRFQELKERIECLKEKSSQGEVYTSDCEFSEEMMDI 127
Query: 55 RKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLY 114
RK++V HGEMVLL+NYS+LN+ GLVKILKKYDKRTG L+RLPF Q VL+QPFFTT+ L
Sbjct: 128 RKDLVTIHGEMVLLKNYSSLNFAGLVKILKKYDKRTGGLLRLPFTQLVLRQPFFTTEPLT 187
Query: 115 KLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESL 174
+LV ECE L+ LFP P+ + P S T +P E + E++
Sbjct: 188 RLVHECEENLELLFPLQAEVIQSTPPPENQSRPPVDSATNA-----LP-EASSTLGDETV 241
Query: 175 YM-KSTVSALNVLQEIRSGSSTVSMFSL 201
Y+ +ST++A+ ++ ++ SST + FS
Sbjct: 242 YIYRSTLAAMRAIKGLQKASSTSNPFSF 269