Miyakogusa Predicted Gene
- Lj4g3v1879170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1879170.1 tr|A9RWM8|A9RWM8_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,65.08,7e-18,DnaJ/Hsp40 cysteine-rich domain,Heat shock
protein DnaJ, cysteine-rich domain; no description,Heat s,CUFF.49791.1
(123 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g12370.1 199 5e-52
Glyma04g19020.1 188 1e-48
Glyma06g29540.1 188 1e-48
Glyma13g23630.1 183 3e-47
Glyma06g07270.1 108 2e-24
Glyma04g07170.1 95 2e-20
Glyma06g07270.2 79 1e-15
Glyma19g29900.1 56 9e-09
>Glyma17g12370.1
Length = 133
Score = 199 bits (507), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 1 MAHSLSFAPICSLKSSNR--IVTGNSVARTAFPMKEACQNSKARNFQSLEVKATDDKTP- 57
MAHSL FAPICSLKSSNR VTGNSV R AF MKE CQNS+ NFQSL+VKAT+D T
Sbjct: 1 MAHSLCFAPICSLKSSNRPGAVTGNSVTRKAFEMKEVCQNSEVPNFQSLKVKATEDNTTK 60
Query: 58 STKARSIVCADCDGNGAILCTQCQGNGVNLVDHFNGRYKAGGLCWLCRGKKDILCGSCNG 117
STK RSIVC+DCDGNGAI CTQC+G GVN VDHFNG++KAGGLCWLCRGK+DILCGSCNG
Sbjct: 61 STKVRSIVCSDCDGNGAISCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGSCNG 120
Query: 118 AGFIGG 123
AGF+GG
Sbjct: 121 AGFLGG 126
>Glyma04g19020.1
Length = 129
Score = 188 bits (478), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 105/125 (84%), Gaps = 5/125 (4%)
Query: 1 MAHSLSFAPICSLKSS--NRIVTGNSVARTAFPMKEACQNSKARNFQSLEVKATDDKTPS 58
MAHSLSFAPICS KSS ++GNSVAR AF + EACQ+SKARNFQSL+ D PS
Sbjct: 1 MAHSLSFAPICSFKSSCTQGAISGNSVARKAFQINEACQDSKARNFQSLKAA---DGNPS 57
Query: 59 TKARSIVCADCDGNGAILCTQCQGNGVNLVDHFNGRYKAGGLCWLCRGKKDILCGSCNGA 118
TK +SIVC DC+GNGAILCTQC+G GVN VDHFNG++KAGGLCWLCRGK+DILCGSCNGA
Sbjct: 58 TKTKSIVCPDCEGNGAILCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGSCNGA 117
Query: 119 GFIGG 123
GFIGG
Sbjct: 118 GFIGG 122
>Glyma06g29540.1
Length = 133
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 105/127 (82%), Gaps = 5/127 (3%)
Query: 1 MAHSLSFAPICSLKSSNR----IVTGNSVARTAFPMKEACQNSKARNFQSLEVKATDDKT 56
MAH LSFAPICS KSS+ VTGNSV + EAC +SKARNFQSL+VKA DD
Sbjct: 1 MAHPLSFAPICSFKSSSTPGALTVTGNSVVSAFIRINEACHDSKARNFQSLKVKAADDN- 59
Query: 57 PSTKARSIVCADCDGNGAILCTQCQGNGVNLVDHFNGRYKAGGLCWLCRGKKDILCGSCN 116
PSTK +SIVC+DC+GNGAILCTQC+G GVN VDHFNG++KAGGLCWLCRGK+DILCGSCN
Sbjct: 60 PSTKTKSIVCSDCEGNGAILCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGSCN 119
Query: 117 GAGFIGG 123
GAGFIGG
Sbjct: 120 GAGFIGG 126
>Glyma13g23630.1
Length = 133
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 105/126 (83%), Gaps = 3/126 (2%)
Query: 1 MAHSLSFAPICSLKSSNR--IVTGNSVARTAFPMKEACQNSKARNFQSLEVKATDDKTPS 58
M+++L FAPICSLKS NR + GNSV + AF M E CQNSK +FQSL+VKAT+DKT
Sbjct: 1 MSYTLCFAPICSLKSPNRPGTIAGNSVTQKAFGMNEVCQNSKVPSFQSLKVKATEDKTTQ 60
Query: 59 TKA-RSIVCADCDGNGAILCTQCQGNGVNLVDHFNGRYKAGGLCWLCRGKKDILCGSCNG 117
+K RSIVC+DCDGNGA CTQC+G GVN VDHFNG++KAGGLCWLCRGKKDILCGSCNG
Sbjct: 61 SKTIRSIVCSDCDGNGAKSCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKKDILCGSCNG 120
Query: 118 AGFIGG 123
AGF+GG
Sbjct: 121 AGFLGG 126
>Glyma06g07270.1
Length = 132
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 30 FPMKEACQNSKARNFQSLEVKATDDKTPS---TKARSIVCADCDGNGAILCTQCQGNGVN 86
F + A Q A ++ + KA D + TK S++CADCDGNGA+LC+QC+G+GVN
Sbjct: 29 FGVNYAFQVPIATKYRYVITKAAKDNQSTNRNTKPNSVICADCDGNGAVLCSQCKGSGVN 88
Query: 87 LVDHFNGRYKAGGLCWLCRGKKDILCGSCNGAGFIGG 123
VD FNG++KAG CWLC G+K++LCG+CNGAGF+GG
Sbjct: 89 SVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGG 125
>Glyma04g07170.1
Length = 150
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 7/81 (8%)
Query: 50 KATDDKTPSTKARSIVCADCDGNG-------AILCTQCQGNGVNLVDHFNGRYKAGGLCW 102
K + +TK S++CADCDGN A+LC+QC+G+GVN VD FNG++KAG CW
Sbjct: 63 KGNQNTNRNTKPNSVICADCDGNDNCLLILRAVLCSQCKGSGVNSVDIFNGQFKAGDTCW 122
Query: 103 LCRGKKDILCGSCNGAGFIGG 123
LC G+K++LCG+CNG GF+GG
Sbjct: 123 LCGGRKEMLCGNCNGTGFVGG 143
>Glyma06g07270.2
Length = 108
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 30 FPMKEACQNSKARNFQSLEVKATDDKTPS---TKARSIVCADCDGNGAILCTQCQGNGVN 86
F + A Q A ++ + KA D + TK S++CADCDGNGA+LC+QC+G+GVN
Sbjct: 29 FGVNYAFQVPIATKYRYVITKAAKDNQSTNRNTKPNSVICADCDGNGAVLCSQCKGSGVN 88
Query: 87 LVDHFNGRYKAGGLCWLC 104
VD FNG++KAG CWLC
Sbjct: 89 SVDIFNGQFKAGDSCWLC 106
>Glyma19g29900.1
Length = 32
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 74 AILCTQCQGNGVNLVDHFNGRYKAGGLCWLCR 105
AI CTQC+G GVN VD+FNG++KAG LCWLCR
Sbjct: 1 AISCTQCKGIGVNFVDYFNGQFKAGELCWLCR 32