Miyakogusa Predicted Gene

Lj4g3v1879160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1879160.1 tr|B8BQR9|B8BQR9_THAPS Predicted protein
OS=Thalassiosira pseudonana GN=THAPSDRAFT_1376 PE=4
SV=1,38.73,0.000000000000001,DUF3119,Protein of unknown function
DUF3119; seg,NULL,CUFF.49788.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g23640.4                                                       333   6e-92
Glyma13g23640.1                                                       333   6e-92
Glyma13g23640.5                                                       298   3e-81
Glyma17g12380.1                                                       283   7e-77
Glyma13g23640.3                                                       166   2e-41
Glyma13g23640.2                                                       140   1e-33

>Glyma13g23640.4 
          Length = 212

 Score =  333 bits (855), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 167/215 (77%), Positives = 181/215 (84%), Gaps = 3/215 (1%)

Query: 1   MASTLLSVHTCLLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLL 60
           MASTLLSVH  L SQRREKIGCLSG RTS CG QVV + +F GRQI+ S+GNR VV+SLL
Sbjct: 1   MASTLLSVHHFLPSQRREKIGCLSGVRTSFCG-QVVCNSSFCGRQITRSHGNRLVVHSLL 59

Query: 61  GFGKRVKTKSRRETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRV 120
           G  ++VK+   RETVIPEPDYRIPIVLLGIAGGLVYTDN               FQTTRV
Sbjct: 60  G--RKVKSVKSRETVIPEPDYRIPIVLLGIAGGLVYTDNLVPAVPVGLLGLLLLFQTTRV 117

Query: 121 RFVFDDEALEVKVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKP 180
           RFVFDDEALEVK+G+QL+ESGEN FVGGKNRW YSTFVNWEFWWPNFPILVYFKE+QTKP
Sbjct: 118 RFVFDDEALEVKIGEQLQESGENVFVGGKNRWKYSTFVNWEFWWPNFPILVYFKESQTKP 177

Query: 181 EGQIHFFPIIFNGKQLYDIMVERAGPSKNSGPRES 215
           EGQIHFFPIIFNGKQLYD+MVERAGPSK SGP+ES
Sbjct: 178 EGQIHFFPIIFNGKQLYDVMVERAGPSKTSGPKES 212


>Glyma13g23640.1 
          Length = 212

 Score =  333 bits (855), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 167/215 (77%), Positives = 181/215 (84%), Gaps = 3/215 (1%)

Query: 1   MASTLLSVHTCLLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLL 60
           MASTLLSVH  L SQRREKIGCLSG RTS CG QVV + +F GRQI+ S+GNR VV+SLL
Sbjct: 1   MASTLLSVHHFLPSQRREKIGCLSGVRTSFCG-QVVCNSSFCGRQITRSHGNRLVVHSLL 59

Query: 61  GFGKRVKTKSRRETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRV 120
           G  ++VK+   RETVIPEPDYRIPIVLLGIAGGLVYTDN               FQTTRV
Sbjct: 60  G--RKVKSVKSRETVIPEPDYRIPIVLLGIAGGLVYTDNLVPAVPVGLLGLLLLFQTTRV 117

Query: 121 RFVFDDEALEVKVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKP 180
           RFVFDDEALEVK+G+QL+ESGEN FVGGKNRW YSTFVNWEFWWPNFPILVYFKE+QTKP
Sbjct: 118 RFVFDDEALEVKIGEQLQESGENVFVGGKNRWKYSTFVNWEFWWPNFPILVYFKESQTKP 177

Query: 181 EGQIHFFPIIFNGKQLYDIMVERAGPSKNSGPRES 215
           EGQIHFFPIIFNGKQLYD+MVERAGPSK SGP+ES
Sbjct: 178 EGQIHFFPIIFNGKQLYDVMVERAGPSKTSGPKES 212


>Glyma13g23640.5 
          Length = 199

 Score =  298 bits (763), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/215 (71%), Positives = 168/215 (78%), Gaps = 16/215 (7%)

Query: 1   MASTLLSVHTCLLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLL 60
           MASTLLSVH  L SQRREKIGCLSG RTS CG QVV + +F GRQI+ S+GNR VV+SLL
Sbjct: 1   MASTLLSVHHFLPSQRREKIGCLSGVRTSFCG-QVVCNSSFCGRQITRSHGNRLVVHSLL 59

Query: 61  GFGKRVKTKSRRETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRV 120
           G  ++VK+   RETVIPEPDYRIPIVLLGIAGGLVYTDN               FQ    
Sbjct: 60  G--RKVKSVKSRETVIPEPDYRIPIVLLGIAGGLVYTDNLVPAVPVGLLGLLLLFQ---- 113

Query: 121 RFVFDDEALEVKVGDQLEESGENAFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKP 180
                    EVK+G+QL+ESGEN FVGGKNRW YSTFVNWEFWWPNFPILVYFKE+QTKP
Sbjct: 114 ---------EVKIGEQLQESGENVFVGGKNRWKYSTFVNWEFWWPNFPILVYFKESQTKP 164

Query: 181 EGQIHFFPIIFNGKQLYDIMVERAGPSKNSGPRES 215
           EGQIHFFPIIFNGKQLYD+MVERAGPSK SGP+ES
Sbjct: 165 EGQIHFFPIIFNGKQLYDVMVERAGPSKTSGPKES 199


>Glyma17g12380.1 
          Length = 249

 Score =  283 bits (725), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 157/252 (62%), Positives = 172/252 (68%), Gaps = 40/252 (15%)

Query: 1   MASTLLSVHTCLLSQRREKIGC---------LSGFRTSICGGQVVFSPNFSGRQISGSNG 51
           MAS+LLSVH  L SQ   K            LSGFRTSICG QVV +P+F GRQI+ S+G
Sbjct: 1   MASSLLSVHHFLPSQILVKFSIPFQEGKDWFLSGFRTSICG-QVVCNPSFCGRQITRSHG 59

Query: 52  NRFVVNSLLGFGKRVKTKSRRETVIPEPDYRIPIVLLG-IAGGLVYTDNXXXXXXXXXX- 109
           NR VV+SLLG  ++V++   RETVIPEPDYRIPIVLLG IAGGL YTDN           
Sbjct: 60  NRLVVHSLLG--RKVRSVKSRETVIPEPDYRIPIVLLGGIAGGLAYTDNLVPAVPVVSLD 117

Query: 110 --------------------------XXXXXFQTTRVRFVFDDEALEVKVGDQLEESGEN 143
                                            TTRV FVFDDEALEVK+G+QL+ESGEN
Sbjct: 118 CFCCSSIVFLKEAISKIILSGDFSLRLLQVALYTTRVTFVFDDEALEVKIGEQLQESGEN 177

Query: 144 AFVGGKNRWNYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHFFPIIFNGKQLYDIMVER 203
           AFVGGK  W YSTFVNWEFWWPNFPILVYFKETQTKPEGQIH FPIIFNGKQLYD+MVER
Sbjct: 178 AFVGGKKCWKYSTFVNWEFWWPNFPILVYFKETQTKPEGQIHCFPIIFNGKQLYDVMVER 237

Query: 204 AGPSKNSGPRES 215
           AGPSK SGP+ES
Sbjct: 238 AGPSKTSGPKES 249


>Glyma13g23640.3 
          Length = 159

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/129 (69%), Positives = 98/129 (75%), Gaps = 3/129 (2%)

Query: 1   MASTLLSVHTCLLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLL 60
           MASTLLSVH  L SQRREKIGCLSG RTS CG QVV + +F GRQI+ S+GNR VV+SLL
Sbjct: 1   MASTLLSVHHFLPSQRREKIGCLSGVRTSFCG-QVVCNSSFCGRQITRSHGNRLVVHSLL 59

Query: 61  GFGKRVKTKSRRETVIPEPDYRIPIVLLGIAGGLVYTDNXXXXXXXXXXXXXXXFQTTRV 120
           G  ++VK+   RETVIPEPDYRIPIVLLGIAGGLVYTDN               FQTTRV
Sbjct: 60  G--RKVKSVKSRETVIPEPDYRIPIVLLGIAGGLVYTDNLVPAVPVGLLGLLLLFQTTRV 117

Query: 121 RFVFDDEAL 129
           RFVFDDEAL
Sbjct: 118 RFVFDDEAL 126


>Glyma13g23640.2 
          Length = 122

 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 83/99 (83%), Gaps = 3/99 (3%)

Query: 1  MASTLLSVHTCLLSQRREKIGCLSGFRTSICGGQVVFSPNFSGRQISGSNGNRFVVNSLL 60
          MASTLLSVH  L SQRREKIGCLSG RTS CG QVV + +F GRQI+ S+GNR VV+SLL
Sbjct: 1  MASTLLSVHHFLPSQRREKIGCLSGVRTSFCG-QVVCNSSFCGRQITRSHGNRLVVHSLL 59

Query: 61 GFGKRVKTKSRRETVIPEPDYRIPIVLLGIAGGLVYTDN 99
          G  ++VK+   RETVIPEPDYRIPIVLLGIAGGLVYTDN
Sbjct: 60 G--RKVKSVKSRETVIPEPDYRIPIVLLGIAGGLVYTDN 96