Miyakogusa Predicted Gene

Lj4g3v1833610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1833610.1 Non Chatacterized Hit- tr|I3SJI8|I3SJI8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.45,0,FAMILY
NOT NAMED,NULL; Rab subfamily of small GTPases,Small GTPase
superfamily, Rab type; Ran (Ras-r,CUFF.49761.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07420.2                                                       244   1e-65
Glyma06g07420.1                                                       244   1e-65
Glyma06g07410.1                                                       243   3e-65
Glyma04g07370.1                                                       243   3e-65
Glyma04g07360.1                                                       243   3e-65
Glyma05g08260.1                                                       243   3e-65
Glyma06g07400.1                                                       228   1e-60
Glyma04g07350.1                                                       228   1e-60
Glyma04g07370.2                                                       173   3e-44
Glyma06g07420.3                                                        54   4e-08
Glyma05g31810.1                                                        49   1e-06
Glyma08g15080.1                                                        47   6e-06
Glyma10g36420.1                                                        47   7e-06
Glyma20g31150.1                                                        46   9e-06

>Glyma06g07420.2 
          Length = 221

 Score =  244 bits (624), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 122/129 (94%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGDP LHFVE PALAPP+V++DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVLIDLAAQQQHEAELLAAASQP 211

Query: 121 LPDDDDEIF 129
           LPDDDDE F
Sbjct: 212 LPDDDDESF 220


>Glyma06g07420.1 
          Length = 221

 Score =  244 bits (624), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 122/129 (94%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGDP LHFVE PALAPP+V++DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVLIDLAAQQQHEAELLAAASQP 211

Query: 121 LPDDDDEIF 129
           LPDDDDE F
Sbjct: 212 LPDDDDESF 220


>Glyma06g07410.1 
          Length = 221

 Score =  243 bits (621), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 121/129 (93%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGDP LHFVE PALAPP+V +DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQP 211

Query: 121 LPDDDDEIF 129
           LPDDDDE F
Sbjct: 212 LPDDDDESF 220


>Glyma04g07370.1 
          Length = 221

 Score =  243 bits (621), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 121/129 (93%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGDP LHFVE PALAPP+V +DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQP 211

Query: 121 LPDDDDEIF 129
           LPDDDDE F
Sbjct: 212 LPDDDDESF 220


>Glyma04g07360.1 
          Length = 221

 Score =  243 bits (621), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 121/129 (93%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGDP LHFVE PALAPP+V +DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQP 211

Query: 121 LPDDDDEIF 129
           LPDDDDE F
Sbjct: 212 LPDDDDESF 220


>Glyma05g08260.1 
          Length = 221

 Score =  243 bits (620), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 112/129 (86%), Positives = 123/129 (95%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTAR+TY+NV TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARMTYRNVATWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLAKKLAGD GLHFVEMPALAPPDVV+D+ +QQ+NE+E+  AA QP
Sbjct: 152 ISAKSNYNFEKPFLYLAKKLAGDQGLHFVEMPALAPPDVVIDIATQQLNEEEICRAAAQP 211

Query: 121 LPDDDDEIF 129
           LPDD+D++F
Sbjct: 212 LPDDEDDLF 220


>Glyma06g07400.1 
          Length = 221

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/122 (88%), Positives = 114/122 (93%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGD  LHFVE PALAPP+V +DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQP 211

Query: 121 LP 122
           LP
Sbjct: 212 LP 213


>Glyma04g07350.1 
          Length = 221

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/122 (88%), Positives = 114/122 (93%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP 120
           ISAKSNYNFEKPFLYLA+KLAGD  LHFVE PALAPP+V +DL +QQ +E ELL AA+QP
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAGDTNLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQP 211

Query: 121 LP 122
           LP
Sbjct: 212 LP 213


>Glyma04g07370.2 
          Length = 173

 Score =  173 bits (439), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 81/82 (98%), Positives = 82/82 (100%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 60
           MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151

Query: 61  ISAKSNYNFEKPFLYLAKKLAG 82
           ISAKSNYNFEKPFLYLA+KLAG
Sbjct: 152 ISAKSNYNFEKPFLYLARKLAG 173


>Glyma06g07420.3 
          Length = 160

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/22 (100%), Positives = 22/22 (100%)

Query: 1   MFDVTARLTYKNVPTWHRDLCR 22
           MFDVTARLTYKNVPTWHRDLCR
Sbjct: 92  MFDVTARLTYKNVPTWHRDLCR 113


>Glyma05g31810.1 
          Length = 207

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--F 50
           ++DV    T+  +  WH +  +       E  P VL GNKVDV    +R+V  K+     
Sbjct: 89  VYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPFVLLGNKVDVDGGNSRRVTEKKARDWC 148

Query: 51  HRKKNLQYYEISAKSNYNFEKPFLYLAK 78
             + N+ Y+E SAK  YN E+ FL +AK
Sbjct: 149 ASRGNIPYFETSAKEGYNVEEAFLCVAK 176


>Glyma08g15080.1 
          Length = 187

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--F 50
           ++DV    T+  +  WH +  +       E  P VL GNKVDV    +R+V  K+     
Sbjct: 89  VYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPFVLLGNKVDVDGGNSRRVTEKKARDWC 148

Query: 51  HRKKNLQYYEISAKSNYNFEKPFLYLAK 78
             + N+ Y+E SAK  YN E+ F  +AK
Sbjct: 149 ASRGNIPYFETSAKEGYNVEEAFSCVAK 176


>Glyma10g36420.1 
          Length = 206

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 13/111 (11%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--F 50
           ++DV    ++  +  WH +  +          P +L GNK+D+    +R V  K+     
Sbjct: 87  VYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWC 146

Query: 51  HRKKNLQYYEISAKSNYNFEKPFLYLAKKLAG---DPGLHFVEMPALAPPD 98
             K N+ Y+E SAK +YN +  FL +AK       +  ++F  +P  A P+
Sbjct: 147 ASKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 197


>Glyma20g31150.1 
          Length = 206

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 13/111 (11%)

Query: 1   MFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--F 50
           ++DV    ++  +  WH +  +          P +L GNK+D+    +R V  K+     
Sbjct: 87  VYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWC 146

Query: 51  HRKKNLQYYEISAKSNYNFEKPFLYLAKKLAG---DPGLHFVEMPALAPPD 98
             K N+ Y+E SAK +YN +  FL +AK       +  ++F  +P  A P+
Sbjct: 147 AAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 197