Miyakogusa Predicted Gene

Lj4g3v1789220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1789220.1 Non Chatacterized Hit- tr|I1MUE6|I1MUE6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.19,0,DUF92,Protein
of unknown function DUF92, TMEM19; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,Protein ,CUFF.49725.1
         (290 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g12920.1                                                       374   e-104
Glyma05g08090.1                                                       105   6e-23

>Glyma17g12920.1 
          Length = 293

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/285 (67%), Positives = 215/285 (75%), Gaps = 2/285 (0%)

Query: 8   WFQPSFAVAISFLIAFRAHRKKSLDTSGALAGFIVMSIHFFAGYRFGAMLLAFFFSSSKL 67
           + Q   AV I+F IAFRAHRKKSL TSGA+AGF VM++H F GYRFGAMLLAFF+SSS L
Sbjct: 9   FLQLFIAVFIAFSIAFRAHRKKSLSTSGAIAGFFVMALHIFVGYRFGAMLLAFFYSSSTL 68

Query: 68  TKLGEDIKRVVDPEFKEGGQRNWLQVLSNSGIASVLVVYIWVLTQGQDMCLNSKDSPHVT 127
           TK+GEDIKR+VDPEFKEGGQRNW+QVL+NSGIASVLVV IWVLT+G+D CLNS++SP +T
Sbjct: 69  TKVGEDIKRIVDPEFKEGGQRNWIQVLANSGIASVLVVAIWVLTEGKDKCLNSEESPLIT 128

Query: 128 YLIGAVIGHYSCCNGDTWSSELGILSDDRPRLITTFKRVRRGINGAVTKTXXXXXXXXXF 187
            LIGAVIGHYSCCNGDTWSSELGILSD++PRLIT FK V++G NG VTK           
Sbjct: 129 ALIGAVIGHYSCCNGDTWSSELGILSDEKPRLITNFKFVKKGTNGGVTKRGLLAAAAAGS 188

Query: 188 VIGLSFVLMGLLTASCE--PDLVLKQLLVIPIATVAGLLGSVIDSLLGATLQFTGFCSLR 245
           VIGLSFVL+G+    CE     VLKQLLVIPIAT+AGL GSVIDSLLGATLQFTGFCS+R
Sbjct: 189 VIGLSFVLLGISATRCEGKGSTVLKQLLVIPIATLAGLCGSVIDSLLGATLQFTGFCSIR 248

Query: 246 QXXXXXXXXXXXXISGVDILDNNAXXXXXXXXXXXXXXXACYYIF 290
                        ISG +ILDNNA               AC YIF
Sbjct: 249 GKMVGKPGPTVRRISGANILDNNAVNFVSILLTSFFTSIACLYIF 293


>Glyma05g08090.1 
          Length = 170

 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 70/109 (64%), Gaps = 2/109 (1%)

Query: 163 FKRVRRGINGAVTKTXXXXXXXXXFVIGLSFVLMGLLTASCEPD--LVLKQLLVIPIATV 220
           F+ V++G NG VTK           VIGLSFVL+G+    CE     VLKQL VIP+AT+
Sbjct: 22  FQFVKKGTNGGVTKRGLLAAAAAGSVIGLSFVLLGISATRCEGKGSTVLKQLPVIPVATL 81

Query: 221 AGLLGSVIDSLLGATLQFTGFCSLRQXXXXXXXXXXXXISGVDILDNNA 269
           AGL GSVIDSLLGATLQF+GFCS+R             ISG +ILDNNA
Sbjct: 82  AGLCGSVIDSLLGATLQFSGFCSIRGKMVGKPGSTVRRISGANILDNNA 130