Miyakogusa Predicted Gene

Lj4g3v1787010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1787010.1 Non Chatacterized Hit- tr|J3MXC7|J3MXC7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,51.75,2e-18,seg,NULL; coiled-coil,NULL,CUFF.49740.1
         (397 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g13080.1                                                       503   e-142

>Glyma17g13080.1 
          Length = 1388

 Score =  503 bits (1294), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/398 (67%), Positives = 297/398 (74%), Gaps = 6/398 (1%)

Query: 6    RPPTLHGIPRENRTLHMSLTEACNSQRNILVLDLENKPLEMPSSTLNITQDLAMT-EGLS 64
            R PTLHGIPRENR LHMSLTEA N Q+N+L LD E+KPL++PSS  ++TQ+L  T EGL 
Sbjct: 990  RHPTLHGIPRENRMLHMSLTEASNYQKNMLALDSESKPLDLPSSIDDLTQNLGPTMEGLR 1049

Query: 65   DALVESPKDQTCEAPKQADVEALKEAPLEIPKEVLIEFQHEAPIEAPNEVSKEADTVSNS 124
            DAL E+PKDQ CEAP Q  +EALKEA LE PKEV  EF  EAPIEAPNE+SKEADTVSNS
Sbjct: 1050 DALDEAPKDQPCEAPTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNEISKEADTVSNS 1109

Query: 125  HERKRPIKIKVKQSSATSRADTDNQMVERSLGARNEMDHGASSSVSVDAPQRNFVETLSI 184
            HERKRPIKIKVKQSSATSRADTDNQ+VERSLG RNEMDHGASSSVSVDAPQRNF ET+SI
Sbjct: 1110 HERKRPIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETVSI 1169

Query: 185  SNHNIEEVNSCHDHCSRMTASIGSAKFLSNGDELVKELQCTADSSVVHXXXXXXXXXXXX 244
            SNHNI+EVNS HD  SRMTASIGSAKFLS+GDELVKELQCTADSS+V+            
Sbjct: 1170 SNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSS 1229

Query: 245  XXXXXXXXXXARRYVSLQTLSASRFDVDGGSLGKEISARGXXXXXXXXXXXXXXXXX--- 301
                      ARRY SLQTLS +RFD DG  LGKEISARG                    
Sbjct: 1230 IIQDNNIDADARRYASLQTLSVARFDPDGEPLGKEISARGKEKHKSKEKKRKRESNKGHH 1289

Query: 302  -DPEYXXXXXXXXXXXXXXXXMAKLQGDAAKRSSVDLSSKKEEPEVD-VAKQLKSVEPSG 359
             DPEY                +AKLQ D AKRSS+D+SSKKEEP VD VA+Q+ SVEP+G
Sbjct: 1290 DDPEYLERKRLKKEKKRREKELAKLQSDEAKRSSIDMSSKKEEPVVDVVARQVTSVEPTG 1349

Query: 360  YNSQSEFRRIDATKPEASEGTSGAPKIRIKIKNRLLSK 397
            Y+S+ E ++ID TKPE SEGTSGAPKIRIKIKNR+LSK
Sbjct: 1350 YDSKLEIKKIDTTKPEPSEGTSGAPKIRIKIKNRMLSK 1387