Miyakogusa Predicted Gene

Lj4g3v1784870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1784870.2 Non Chatacterized Hit- tr|K3XMF4|K3XMF4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si003077,38.89,8e-19,Usp,UspA; no description,Rossmann-like
alpha/beta/alpha sandwich fold; Adenine nucleotide alpha
hydr,CUFF.49709.2
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g13160.1                                                       273   8e-74
Glyma06g23310.1                                                       241   5e-64
Glyma18g22960.1                                                       227   7e-60
Glyma05g07850.1                                                       210   8e-55
Glyma06g23310.3                                                       100   7e-22
Glyma06g23310.2                                                        74   7e-14
Glyma02g13450.1                                                        55   4e-08
Glyma17g08900.1                                                        54   1e-07

>Glyma17g13160.1 
          Length = 197

 Score =  273 bits (698), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 136/191 (71%), Positives = 152/191 (79%), Gaps = 3/191 (1%)

Query: 1   MDVRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQ 60
           MDVRNIAVVVEDVDAARTAL WAL NIIRYGDIITL+HVYPL+R+K+K+KARLLRL+GFQ
Sbjct: 1   MDVRNIAVVVEDVDAARTALQWALDNIIRYGDIITLLHVYPLSRSKSKSKARLLRLRGFQ 60

Query: 61  LALSFQEICNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAMEH 120
           LALSFQ+ICNNFSNTKVEIVV EE++EGMK+VA V+EI  SMLVVGLHD SF+Y LAM H
Sbjct: 61  LALSFQDICNNFSNTKVEIVVTEENKEGMKIVAAVREIGASMLVVGLHDQSFLYSLAMVH 120

Query: 121 KSIASYFNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMDFSQIHICRLQVSDTLPQKVKY 180
            +IA+YFNCR+LAI Q                   T MDFSQI I  LQV +  P KVKY
Sbjct: 121 SNIANYFNCRILAINQ---PPESPLSPMVGVQGSSTNMDFSQIDISGLQVPEPPPPKVKY 177

Query: 181 RICPDPAAIIC 191
           RICPDP AIIC
Sbjct: 178 RICPDPTAIIC 188


>Glyma06g23310.1 
          Length = 200

 Score =  241 bits (614), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 121/192 (63%), Positives = 140/192 (72%), Gaps = 3/192 (1%)

Query: 1   MDVRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQ 60
           MDV+ I V VEDVDAARTAL WAL NIIRYGDIITL+HVY  + T++K+KARLLRL GF+
Sbjct: 1   MDVKKIVVAVEDVDAARTALQWALRNIIRYGDIITLLHVYHHS-TRSKSKARLLRLNGFK 59

Query: 61  LALSFQEICNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAM-- 118
           LALSFQ++CNN+ NTKVEI+V E D+EG K+ A V+EI  SMLVVGLHD SF+YKL M  
Sbjct: 60  LALSFQDMCNNYPNTKVEIIVTEGDQEGAKIAATVREIGASMLVVGLHDSSFLYKLTMAH 119

Query: 119 EHKSIASYFNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMDFSQIHICRLQVSDTLPQKV 178
            H SI S FNCRV AIKQ                   T MDFSQI + RLQV  T PQK+
Sbjct: 120 SHNSIGSIFNCRVFAIKQPHVSPVRPMISAVSVLDSSTNMDFSQIDLSRLQVPRTPPQKI 179

Query: 179 KYRICPDPAAII 190
            YRICP+P+AII
Sbjct: 180 PYRICPNPSAII 191


>Glyma18g22960.1 
          Length = 209

 Score =  227 bits (578), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/191 (60%), Positives = 140/191 (73%), Gaps = 8/191 (4%)

Query: 1   MDVRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYP-LTRTKTKNKARLLRLKGF 59
           MDV+ I VVVEDV+AARTAL WAL NIIRYGDIITL+HVY   TR+++++KARLLRL GF
Sbjct: 1   MDVKKIVVVVEDVNAARTALEWALRNIIRYGDIITLLHVYNHSTRSRSRSKARLLRLNGF 60

Query: 60  QLALSFQEICNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAME 119
           +LALSFQ++CN++ NTKVEI+V E D+EG K+ A V+EI  SMLVVGLHD+SF+Y     
Sbjct: 61  KLALSFQDMCNSYPNTKVEIIVIEGDQEGTKIAATVREIGASMLVVGLHDYSFLY----- 115

Query: 120 HKSIASYFNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMDFSQIHICRLQVSDTLPQKVK 179
             +IAS FNCRVLAIKQ                   T MDFSQI + RLQV  + P K+ 
Sbjct: 116 --NIASIFNCRVLAIKQSHASSVRPMICALSVLDSSTNMDFSQIDVSRLQVPRSPPPKIP 173

Query: 180 YRICPDPAAII 190
           YRICP+P+AII
Sbjct: 174 YRICPNPSAII 184


>Glyma05g07850.1 
          Length = 157

 Score =  210 bits (535), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 97/115 (84%), Positives = 110/115 (95%)

Query: 1   MDVRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQ 60
           MDVRNIAVVVEDVDAARTAL WALHNIIRYGDIITL+HVYPLTR+K+KNKAR+LRL+GFQ
Sbjct: 1   MDVRNIAVVVEDVDAARTALQWALHNIIRYGDIITLLHVYPLTRSKSKNKARVLRLRGFQ 60

Query: 61  LALSFQEICNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYK 115
           LALSFQ+ICNNFSNTKVEIVV EE++EGMK+VAMV++I  SMLVVGLHD SF+Y+
Sbjct: 61  LALSFQDICNNFSNTKVEIVVTEENKEGMKIVAMVRQIGASMLVVGLHDQSFLYR 115


>Glyma06g23310.3 
          Length = 100

 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 102 MLVVGLHDHSFIYKLAM--EHKSIASYFNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMD 159
           MLVVGLHD SF+YKL M   H SI S FNCRV AIKQ                   T MD
Sbjct: 1   MLVVGLHDSSFLYKLTMAHSHNSIGSIFNCRVFAIKQPHVSPVRPMISAVSVLDSSTNMD 60

Query: 160 FSQIHICRLQVSDTLPQKVKYRICPDPAAII 190
           FSQI + RLQV  T PQK+ YRICP+P+AII
Sbjct: 61  FSQIDLSRLQVPRTPPQKIPYRICPNPSAII 91


>Glyma06g23310.2 
          Length = 83

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 46/89 (51%), Gaps = 15/89 (16%)

Query: 102 MLVVGLHDHSFIYKLAMEHKSIASYFNCRVLAIKQXXXXXXXXXXXXXXXXXXXTEMDFS 161
           MLVVGLHD SF+YK               V AIKQ                   T MDFS
Sbjct: 1   MLVVGLHDSSFLYK---------------VFAIKQPHVSPVRPMISAVSVLDSSTNMDFS 45

Query: 162 QIHICRLQVSDTLPQKVKYRICPDPAAII 190
           QI + RLQV  T PQK+ YRICP+P+AII
Sbjct: 46  QIDLSRLQVPRTPPQKIPYRICPNPSAII 74


>Glyma02g13450.1 
          Length = 237

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 3/119 (2%)

Query: 3   VRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVY-PLTRTKT-KNKARLLRLKGFQ 60
            R I +VV+    A++A+ WAL + ++  D I L+HV  P  +  T +  ++ +  + ++
Sbjct: 69  ARKIMIVVDSSLEAKSAVQWALTHTVQDHDTIVLLHVMKPSNKQATDEQSSKEIAPRAYE 128

Query: 61  LALSFQEICNN-FSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAM 118
           LA SF+ +C+      ++EI V E   +G K+V   K+   ++LV+G    S  ++L M
Sbjct: 129 LASSFKNMCHGKRPEVQIEIAVIEGKEKGPKIVEEAKKQGVALLVLGQKKRSTTWRLLM 187


>Glyma17g08900.1 
          Length = 228

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 6   IAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQLALSF 65
           I VVV+    A+ AL WAL + ++  D + L+HV   TR  T++ ++   +K +QL L  
Sbjct: 65  ILVVVDSSFEAKGALEWALSHTVQTQDTVVLVHVARPTREGTESGSK-FNVKTYQLLLDM 123

Query: 66  QEICN-NFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFI 113
           + +C        V +V+ E + +G+ +V   K+ + S+LVVG    S +
Sbjct: 124 KSMCEMKKPGVVVNVVMLEGEEKGVAIVQEAKKQRVSLLVVGQRKQSIL 172