Miyakogusa Predicted Gene

Lj4g3v1784860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1784860.1 Non Chatacterized Hit- tr|I1LB73|I1LB73_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,37.3,3e-19,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; no
description,Nucleic acid-bindin,CUFF.49779.1
         (210 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g07840.1                                                       248   2e-66
Glyma10g29070.1                                                        99   3e-21
Glyma10g29070.2                                                        96   2e-20
Glyma20g38260.1                                                        96   3e-20

>Glyma05g07840.1 
          Length = 207

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 3/190 (1%)

Query: 22  PNHHLPRHFSTT-LLXXXXXXXXXXXXXXXXXXQTERTIFDRPLENGLDVGIYRAILVGK 80
           PN +  RHFST  L                   + E+ + DRPLENGLDVGIYRAILVGK
Sbjct: 20  PNAY--RHFSTDHLFDSDEADSAPDPPAPDAVQEEEKFVIDRPLENGLDVGIYRAILVGK 77

Query: 81  VGQTPLQKKLKSGTVVTLLSLGTGGIRNNRRPLDNESPRDYANRCAVQWHRVTIYPERLG 140
            GQ PLQKKLKSGT VTLLS+GTGGI NNRRP  +E+P+DYANR A+QWHRV++YP++LG
Sbjct: 78  AGQAPLQKKLKSGTSVTLLSVGTGGIHNNRRPRVDENPKDYANRSAIQWHRVSVYPQKLG 137

Query: 141 TLVMKHATPGSTLYVEGNLESKVFSDPTTGLVRRIREVSVRRNGRVVFLGQGGDADADTQ 200
            LV KH  PGS LYVEGNLE+K F+DP TG+ RRIRE++VRRNGR+VFLG+GGDA+  T 
Sbjct: 138 DLVTKHVVPGSMLYVEGNLETKCFTDPITGIARRIREIAVRRNGRIVFLGEGGDAELQTL 197

Query: 201 QNDLKAVGYY 210
             DL+AVGYY
Sbjct: 198 PKDLRAVGYY 207


>Glyma10g29070.1 
          Length = 217

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 81/126 (64%), Gaps = 6/126 (4%)

Query: 71  GIYRAILVGKVGQTPLQKKLKSGTVVTLLSLGTGGIRNNRRPLDNESPRDYANRCAVQWH 130
           G+++AI+ GKVGQ P+QK L++G  +T+ ++GTGG+ + R     + P+D       QWH
Sbjct: 86  GVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRI----QGPKDLPK--PAQWH 139

Query: 131 RVTIYPERLGTLVMKHATPGSTLYVEGNLESKVFSDPTTGLVRRIREVSVRRNGRVVFLG 190
           R+ ++ + LGT  ++     S++YVEG++E++V++D   G V+ I E+ VRR+GR+  + 
Sbjct: 140 RIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIK 199

Query: 191 QGGDAD 196
            G   D
Sbjct: 200 NGESID 205


>Glyma10g29070.2 
          Length = 207

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 78/119 (65%), Gaps = 6/119 (5%)

Query: 71  GIYRAILVGKVGQTPLQKKLKSGTVVTLLSLGTGGIRNNRRPLDNESPRDYANRCAVQWH 130
           G+++AI+ GKVGQ P+QK L++G  +T+ ++GTGG+ + R     + P+D       QWH
Sbjct: 86  GVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRI----QGPKDLPK--PAQWH 139

Query: 131 RVTIYPERLGTLVMKHATPGSTLYVEGNLESKVFSDPTTGLVRRIREVSVRRNGRVVFL 189
           R+ ++ + LGT  ++     S++YVEG++E++V++D   G V+ I E+ VRR+G   ++
Sbjct: 140 RIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGMATYM 198


>Glyma20g38260.1 
          Length = 216

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 79/126 (62%), Gaps = 6/126 (4%)

Query: 71  GIYRAILVGKVGQTPLQKKLKSGTVVTLLSLGTGGIRNNRRPLDNESPRDYANRCAVQWH 130
           G+++AI+ GKVGQ P+QK L++G  +T+ ++GTGG+ + R     + P+D       QWH
Sbjct: 85  GVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRI----QGPKDLPK--PAQWH 138

Query: 131 RVTIYPERLGTLVMKHATPGSTLYVEGNLESKVFSDPTTGLVRRIREVSVRRNGRVVFLG 190
           R+ ++ + LG   ++     S++YVEG++E +V++D   G V+ I E+ VRR+G++  + 
Sbjct: 139 RIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEICVRRDGKICLIK 198

Query: 191 QGGDAD 196
            G   D
Sbjct: 199 SGESID 204