Miyakogusa Predicted Gene

Lj4g3v1720820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1720820.1 Non Chatacterized Hit- tr|C6TFB1|C6TFB1_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,63.93,0.0000000000002,seg,NULL,CUFF.49633.1
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g00360.1                                                        79   1e-15
Glyma17g08680.1                                                        78   3e-15

>Glyma05g00360.1 
          Length = 392

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 1  MASSTSFAPFVFLFLVIGAVARPLHPLPSKGHHGSRQPLQTWRPYNIAQH-SFGKIALLS 59
          MAS  SF PFVFL LVIG  ARPL+PLPSKG  G+R+PLQT+RPYNIA   S G++   +
Sbjct: 1  MASLPSFTPFVFLLLVIGCNARPLYPLPSKGDDGNRKPLQTFRPYNIAHRGSNGELPEET 60

Query: 60 H 60
          H
Sbjct: 61 H 61


>Glyma17g08680.1 
          Length = 388

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 42/48 (87%)

Query: 1  MASSTSFAPFVFLFLVIGAVARPLHPLPSKGHHGSRQPLQTWRPYNIA 48
          MAS  SFAPFVFL LVIG+ AR L+PLPSKG +GSR+PLQT+RPYNIA
Sbjct: 1  MASLPSFAPFVFLLLVIGSNARTLYPLPSKGGNGSRKPLQTFRPYNIA 48