Miyakogusa Predicted Gene

Lj4g3v1719710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719710.1 gene.g55471.t1.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08600.1                                                       198   2e-51
Glyma05g00430.1                                                       186   7e-48

>Glyma17g08600.1 
          Length = 241

 Score =  198 bits (504), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 113/139 (81%), Gaps = 5/139 (3%)

Query: 34  LTSIS-----TSLQFPRAVTTANQATITNDAELPTMSEILSASKSQNLHLQLQTLGPFFR 88
           LTSIS      SLQ PR    +  AT      +P+M+EIL AS++Q L LQL+TLGPFFR
Sbjct: 42  LTSISPHFNSNSLQKPRFPRASANATTNEAVIMPSMAEILDASRAQKLDLQLKTLGPFFR 101

Query: 89  ITARSSVTEAELGKAEGIVRFWVGGKILHLDSIKLRRETLNMEKSIFGLGLYIGAVAIRH 148
           ITARS VT  ELG+AEG+VRFWVGGKILHLDSIKL+RETL+MEKSIFGLGL+IGAVAIRH
Sbjct: 102 ITARSMVTGTELGRAEGLVRFWVGGKILHLDSIKLQRETLDMEKSIFGLGLFIGAVAIRH 161

Query: 149 GYDCGCKTAQLLAINESDL 167
           GYD GCKTAQLLAIN+SDL
Sbjct: 162 GYDSGCKTAQLLAINDSDL 180


>Glyma05g00430.1 
          Length = 230

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 98/139 (70%), Positives = 113/139 (81%), Gaps = 10/139 (7%)

Query: 34  LTSIST-----SLQFPRAVTTANQATITNDAELPTMSEILSASKSQNLHLQLQTLGPFFR 88
           LTSIS      SLQ PR    + +AT TN+    T+SEIL +S++Q L L+L+TL PFFR
Sbjct: 42  LTSISPHFNSHSLQKPRFPPASAKAT-TNE----TLSEILDSSRAQKLDLELKTLEPFFR 96

Query: 89  ITARSSVTEAELGKAEGIVRFWVGGKILHLDSIKLRRETLNMEKSIFGLGLYIGAVAIRH 148
           ITARS VT+ ELGKAEG +RFWVGGKILHLDSIKL+RETL MEKSIFGLGL+IGAVAIRH
Sbjct: 97  ITARSVVTDKELGKAEGFIRFWVGGKILHLDSIKLQRETLGMEKSIFGLGLFIGAVAIRH 156

Query: 149 GYDCGCKTAQLLAINESDL 167
           GYD GCKTAQLL+IN+SDL
Sbjct: 157 GYDSGCKTAQLLSINDSDL 175