Miyakogusa Predicted Gene

Lj4g3v1686520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1686520.1 tr|C4WL33|C4WL33_9RHIZ Alcohol dehydrogenase
OS=Ochrobactrum intermedium LMG 3301 GN=OINT_2000726
PE,62.9,2e-19,GroES-like,GroES-like; seg,NULL; QUINONE OXIDOREDUCTASE,
BACTERIA AND PLANT,NULL; ALCOHOL DEHYDROGEN,gene.g55456.t1.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36990.1                                                       130   3e-31
Glyma09g00330.1                                                       108   2e-24
Glyma12g36980.1                                                        55   1e-08

>Glyma12g36990.1 
          Length = 376

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 63/72 (87%)

Query: 60  EMVKAIRVHELGGPQVLKWEDVEIGEPKEGEVRVKNKAIGVNFIDVYFRKGVYKASSTPF 119
           +MVKAIRVHELGGPQVLKWEDVEIG+PKEGEVRV+NKAIGVNFIDVYFRKGVYKA S PF
Sbjct: 52  DMVKAIRVHELGGPQVLKWEDVEIGDPKEGEVRVRNKAIGVNFIDVYFRKGVYKAPSFPF 111

Query: 120 TPGMSCCCCCST 131
           TPGM      + 
Sbjct: 112 TPGMEAVGVVTA 123


>Glyma09g00330.1 
          Length = 142

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 56/64 (87%)

Query: 60  EMVKAIRVHELGGPQVLKWEDVEIGEPKEGEVRVKNKAIGVNFIDVYFRKGVYKASSTPF 119
           +MVKAIRV +LG PQVLKWEDVEIGE KEGEVRV+NKA+GVNFIDVYFR  VYK  S P+
Sbjct: 5   KMVKAIRVEQLGDPQVLKWEDVEIGEAKEGEVRVRNKAVGVNFIDVYFRTRVYKVPSLPY 64

Query: 120 TPGM 123
           TPG+
Sbjct: 65  TPGV 68


>Glyma12g36980.1 
          Length = 191

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 4/44 (9%)

Query: 78  WEDVEIGEPKEGEVRVKNKAIGVNFIDVYFRKGVYKASSTPFTP 121
           ++ + +G+P   EV +KNKA+GVNFIDVYFR GVYK  S P+TP
Sbjct: 62  YQSLPLGDP---EV-LKNKAVGVNFIDVYFRTGVYKVPSLPYTP 101