Miyakogusa Predicted Gene

Lj4g3v1684380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1684380.1 tr|F2EID4|F2EID4_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,44.12,3e-18,seg,NULL,CUFF.49601.1
         (322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g00560.1                                                       333   2e-91
Glyma17g08520.1                                                       177   2e-44

>Glyma05g00560.1 
          Length = 317

 Score =  333 bits (853), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/310 (56%), Positives = 200/310 (64%), Gaps = 2/310 (0%)

Query: 14  RSNCSNSSMEXXXXXXXXXXXXXXXXXXXFSPLPSSVLRLWRQAAQRNLRNRWTQLASYK 73
           R+   NS+ME                    SPLP SVLRLWR AAQRNLRN+W+QL S K
Sbjct: 7   RATLLNSAMETLDSAVSTPSRTSDSKPQTSSPLPPSVLRLWRPAAQRNLRNQWSQLVSCK 66

Query: 74  DQWSSISSAARSHATALVNSHLSIRYMPSVKLGVLSDMPNIRERACFXXXXXXXXXXXXX 133
           ++W S SS  RSHATALVN HLS RYMP +KLGVLSDMP+I++RAC              
Sbjct: 67  NRWFSASSVGRSHATALVNFHLSQRYMPDMKLGVLSDMPDIKKRACLKLFKRQELQRSKL 126

Query: 134 XXSYKEXXXXXXXXXXXXRLMKCFFKGSNCSSLLQFSCYSEDQXXXXXXXXXXXIPVFAF 193
             SYK+            R MKCFFKGSN S LLQFS  S DQ           IPVF F
Sbjct: 127 VLSYKDMVGIVSDMINVSRSMKCFFKGSNNSPLLQFSYNSADQSDSGEGGEGGGIPVFTF 186

Query: 194 LPISSHDKLAEELVQMFIXXXXXXXXXXXXXMSVGNDPSQVNQLSWSAQLYNDEFKDLRD 253
             I+SH+K AEEL+QMF              MS+G D S V QL WS QLY++EFKDLRD
Sbjct: 187 YSITSHEKFAEELIQMFSLELCLKRLLVLEFMSIGYDTSAVKQLHWSTQLYDEEFKDLRD 246

Query: 254 CNLFSED--GPVPPRLKDGKSDMVALKFDNQPSPEVLQVYLTTWLAELNIDTFRVNEIFA 311
           CNL+ E+  GPVPPRL+DGKSD+ AL+FDNQP+PEVLQVYLTTWLAE NIDT +VNEIFA
Sbjct: 247 CNLYCEETHGPVPPRLRDGKSDIDALRFDNQPNPEVLQVYLTTWLAEANIDTPKVNEIFA 306

Query: 312 VVGEEMHVSI 321
           +VGEEM VS+
Sbjct: 307 IVGEEMQVSV 316


>Glyma17g08520.1 
          Length = 337

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/188 (53%), Positives = 114/188 (60%), Gaps = 11/188 (5%)

Query: 136 SYKEXXXXXXXXXXXXRLMKCFFKGSNCSSLLQFSCYSEDQXXXXXXXXXXXIPVFAFLP 195
           SY++            R MKCFFKGSN SSLL FS  S DQ           IP F F  
Sbjct: 158 SYRDMVGIVSDMINVSRSMKCFFKGSNNSSLLHFSYNSADQSDSGDGGG---IPAFTFYS 214

Query: 196 ISSHDKLAEELVQMFIXXXXXXXXXXXXXMSVGNDPSQVNQLSWSAQLYNDEFKDLRDCN 255
           I+SH K  E   +  +             MS+  D S V QL WS QLY+DEFKDLRDCN
Sbjct: 215 ITSHGK--ENFTEYILFLFDRVRLLVLEFMSISYDTSAVKQLHWSTQLYDDEFKDLRDCN 272

Query: 256 LFS--EDGPVPPRLKDGKSDMVALKFDNQPSPEVLQVYLTTWLAELNIDTFRVNEIFAVV 313
           L+     GPVPPRL+DGKS + AL+FDNQP+PEVLQVYLTTWLAE+NI    VNEIFA+V
Sbjct: 273 LYCVVTHGPVPPRLRDGKSGIDALRFDNQPNPEVLQVYLTTWLAEVNI----VNEIFAIV 328

Query: 314 GEEMHVSI 321
           GEE  VSI
Sbjct: 329 GEERQVSI 336