Miyakogusa Predicted Gene

Lj4g3v1683310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1683310.1 tr|A9THB8|A9THB8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_170090,62.9,0.000000003,coiled-coil,NULL;
seg,NULL,CUFF.49597.1
         (374 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08470.1                                                       355   4e-98
Glyma05g00610.1                                                       343   1e-94
Glyma11g35010.1                                                       104   2e-22

>Glyma17g08470.1 
          Length = 335

 Score =  355 bits (911), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 205/331 (61%), Positives = 230/331 (69%), Gaps = 16/331 (4%)

Query: 59  ALTDDKKHIQRLEKELLNCFQEIDFLQDRL------------NVRNLELKLEEMGDLQEE 106
           A  +DKKHIQ LEKELLNC QEID+LQD+L            ++R+LELKLE M DLQEE
Sbjct: 6   AHAEDKKHIQGLEKELLNCSQEIDYLQDQLSASNTEVNYLEEHIRSLELKLEGMEDLQEE 65

Query: 107 VFSLREELRRSNSKQFSLTQELETKEIELEQSAFSIEKLEGSFSSIALESQFEVESMKLD 166
           VF LREEL+RSNSK F L QEL+TKEIELE+SA SIEKLE SFSSI LESQFEVESMKLD
Sbjct: 66  VFRLREELKRSNSKHFFLIQELDTKEIELEKSALSIEKLEESFSSITLESQFEVESMKLD 125

Query: 167 MMALEQSLFEAKKTQDEALEESNRLSRLIDELQYALQDTQQTITSXXXXXXXXXXKLDAA 226
           MMALEQSLFEAKK QDE L+E+NR+SR I+ELQ ALQD Q+ I S          KLD A
Sbjct: 126 MMALEQSLFEAKKIQDETLDENNRMSRSIEELQVALQDAQKIIISLNEENRKLKEKLDIA 185

Query: 227 NMNTRLFSRKVGDWLENKNRSHLKRKPSLSEQESKP---EDIRTCGEVLGPLLGSLAMFL 283
           N N+R+ S+K   WLEN +R  L+ + SL+ + +     EDIRT G V GP +G LAM L
Sbjct: 186 NKNSRISSQKDEYWLENNDRLQLETQSSLNGRGNNSTILEDIRTYG-VHGPHVGRLAMIL 244

Query: 284 GPAADLKGKMEMPHQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEMAELRYQFTGLLE 343
             AADLKGKMEM  QIQ                           VQEMAELRYQFT  LE
Sbjct: 245 YLAADLKGKMEMSQQIQEYECLIKKLKEELREEKLRAKEEAEDLVQEMAELRYQFTSSLE 304

Query: 344 EECKRRACIEHASLQRISELEAQLQREQKTP 374
           EECKRRACIEHASLQRI+ELEAQLQRE K P
Sbjct: 305 EECKRRACIEHASLQRIAELEAQLQREHKNP 335


>Glyma05g00610.1 
          Length = 377

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 214/363 (58%), Positives = 246/363 (67%), Gaps = 28/363 (7%)

Query: 27  QHRKEKDVLRSSQSQSFQPIRILERYEKSSPGALTDDKKHIQRLEKELLNCFQEIDFLQD 86
           QHRKEKDVL+SSQSQS QPI++LE+ EKS   A  +DKKHIQRLEKELLNC QEID+LQD
Sbjct: 1   QHRKEKDVLQSSQSQSIQPIQMLEQCEKSKSEAHAEDKKHIQRLEKELLNCSQEIDYLQD 60

Query: 87  RLNVRN------------LELKLEEMGDLQEEVFSLREELRRSNSKQFSLTQELETKEIE 134
           +L+ RN            LELKLE M DLQEEVF LREEL+RS SKQFSL QEL+TKE E
Sbjct: 61  QLSARNAEVNYLEEHIHNLELKLEGMEDLQEEVFRLREELKRSESKQFSLIQELDTKEKE 120

Query: 135 LEQSAFSIEKLEGSFSSIALESQFEVESMKLDMMALEQSLFEAKKTQDEALEESNRLSRL 194
           LE+SA SIEKLE SFSSI LESQFEVESMKLDMM LEQSLFEAKK QDE L+E+NR+SR 
Sbjct: 121 LEKSALSIEKLEESFSSITLESQFEVESMKLDMMVLEQSLFEAKKIQDETLDENNRMSRS 180

Query: 195 IDELQYALQDTQQTITSXXXXXXXXXXKLDAANMNTRLFSRKVGDWLENKNRSHLKRKPS 254
           I+ELQ ALQD Q+ I +          KLD AN N+R+ S+K   WLENK+RS L+ + S
Sbjct: 181 IEELQVALQDAQKIIITLNEEIRELEEKLDTANQNSRISSQKDEYWLENKDRSQLETQSS 240

Query: 255 LS---EQESKPEDIRTCGEVLGPLLGSLAMFLGPAADLKGKMEMPHQIQXXXXXXXXXXX 311
           L+      +  EDIR       P+       + P  ++  +MEM  QIQ           
Sbjct: 241 LNVRGNNSTMQEDIRC------PI-------ISPFYNVMIEMEMSQQIQEYECLIKKLKE 287

Query: 312 XXXXXXXXXXXXXXXXVQEMAELRYQFTGLLEEECKRRACIEHASLQRISELEAQLQREQ 371
                           VQEMAELRYQFTG LEEECKRRAC EHASLQRI+ELEAQL+RE 
Sbjct: 288 ELREEKLKAKEEAEDLVQEMAELRYQFTGSLEEECKRRACFEHASLQRIAELEAQLKREH 347

Query: 372 KTP 374
           K P
Sbjct: 348 KNP 350


>Glyma11g35010.1 
          Length = 107

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 78/132 (59%), Gaps = 25/132 (18%)

Query: 113 ELRRSNSKQFSLTQELETKEIELEQSAFSIEKLEGSFSSIALESQFEVESMKLDMMALEQ 172
           EL+RS+SK+FSL QEL TKE ELE                         +MKLDMM LEQ
Sbjct: 1   ELKRSDSKKFSLIQELHTKEKELE-------------------------NMKLDMMGLEQ 35

Query: 173 SLFEAKKTQDEALEESNRLSRLIDELQYALQDTQQTITSXXXXXXXXXXKLDAANMNTRL 232
           SLFEAKK Q E ++E+NR+S  I+ELQ ALQD Q+ I +          KLD AN N+R+
Sbjct: 36  SLFEAKKIQGETIDENNRMSTSIEELQVALQDAQKNIITLETEIRELEEKLDTANKNSRI 95

Query: 233 FSRKVGDWLENK 244
            S+K   WLENK
Sbjct: 96  SSQKDEYWLENK 107