Miyakogusa Predicted Gene

Lj4g3v1658930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658930.1 Non Chatacterized Hit- tr|C6TNL6|C6TNL6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39700
PE,38.46,0.0003,seg,NULL,CUFF.49557.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g00850.1                                                        49   1e-06

>Glyma05g00850.1 
          Length = 140

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 22/91 (24%)

Query: 27  VFPPINHENLSNQDTPQXXXXXXXXXXXXXCLTTDSDTWVDPHVRKGGDFTGWVSFGFQF 86
           +FPPI+HENL                      +  S    D  +R      GW+S  F  
Sbjct: 14  LFPPIDHENLQ--------------IASQTPPSPPSPQPFDSRLR------GWISISFHI 53

Query: 87  LRSKLSSFWNRGAAFWLIGWLPAAAVVFSCW 117
           LRSKLSS   RG   W IG LP+AA++ SCW
Sbjct: 54  LRSKLSSLMQRG-PIWSIG-LPSAALLMSCW 82