Miyakogusa Predicted Gene

Lj4g3v1658920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658920.1 Non Chatacterized Hit- tr|Q94HA8|Q94HA8_ORYSJ
Putative uncharacterized protein OSJNBb0048A17.15
OS=O,41.79,2e-19,seg,NULL,CUFF.49556.1
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g11080.1                                                       137   3e-33
Glyma05g00840.1                                                        97   5e-21
Glyma12g36440.1                                                        76   1e-14
Glyma13g27130.1                                                        76   1e-14
Glyma12g07960.1                                                        62   2e-10
Glyma11g15490.1                                                        60   1e-09
Glyma13g40640.1                                                        57   5e-09
Glyma12g34890.1                                                        57   8e-09
Glyma15g04790.1                                                        56   2e-08
Glyma12g22660.1                                                        54   4e-08

>Glyma17g11080.1 
          Length = 802

 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 80/113 (70%), Gaps = 3/113 (2%)

Query: 35  DPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXX 94
           D SFSP+VNYLIDCGSS+ T LKDGR FKSDR          DL IS++S   N      
Sbjct: 21  DSSFSPNVNYLIDCGSSHPTQLKDGRIFKSDRETTSLLSTTEDLHISLNS---NLSPSIP 77

Query: 95  XXXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSVQ 147
                 +Q+ARV +EES Y+FYISK GRL++RLYFFPLPDPSFNLTSAVFSVQ
Sbjct: 78  SLSLPLYQTARVFQEESTYSFYISKSGRLWIRLYFFPLPDPSFNLTSAVFSVQ 130


>Glyma05g00840.1 
          Length = 225

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 2/89 (2%)

Query: 59  GRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXXXXXXFQSARVLREESAYTFYIS 118
           GRTFKSDR          DLQIS+DS    +            Q+ARV +EES Y+FYI 
Sbjct: 1   GRTFKSDRETTSLLSTTEDLQISLDSYLSPSVPSSSSLPLH--QTARVFQEESTYSFYIY 58

Query: 119 KPGRLFVRLYFFPLPDPSFNLTSAVFSVQ 147
           K GRL+VRLYFFPLPDPS+NLTSAVFSVQ
Sbjct: 59  KSGRLWVRLYFFPLPDPSYNLTSAVFSVQ 87


>Glyma12g36440.1 
          Length = 837

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 9/110 (8%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           SF P  N+LIDCG+ N   L DGR FKSD           + ++S + +N  +       
Sbjct: 22  SFQPKDNFLIDCGAENTVTLPDGRQFKSDPQARSFLQANDEYKVSANDVNFPS------- 74

Query: 97  XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
               + +AR+  +E+ Y+F++ +PG  ++RLYF+P+ +  F+L  A FSV
Sbjct: 75  --PIYSNARIFIQEAKYSFHLVQPGFHWIRLYFYPIKNNIFDLQKASFSV 122


>Glyma13g27130.1 
          Length = 869

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 9/110 (8%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           SF P  N+LIDCG+ N   L DGR FKSD           + ++S + +N+ +       
Sbjct: 48  SFQPKDNFLIDCGAENTATLPDGRHFKSDPQSRSFLQANDEYKVSANDVNLPS------- 100

Query: 97  XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
               + +AR+  +E+ Y+F++ +PG  ++RL+F+P+ +  F+L  A FSV
Sbjct: 101 --PVYSNARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNNIFDLQKATFSV 148


>Glyma12g07960.1 
          Length = 837

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           +F P+ NYLIDCGS   T + D R F +D           D+  S    +I +       
Sbjct: 25  NFVPTDNYLIDCGSPTNTPI-DSRNFTADSFYKNFLSTQQDIVASTSLKSITSTSDSPL- 82

Query: 97  XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
               + +AR+    S YTF I+K GR ++RLYFFP     +NL++A F+V
Sbjct: 83  ----YSTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYEKYNLSAAKFAV 128


>Glyma11g15490.1 
          Length = 811

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 38  FSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXXX 97
           F P  NYLIDCGS   T + D R F +D           D+  S    +I +        
Sbjct: 26  FVPIDNYLIDCGSPTNTSI-DSRNFSADSFYKNFLSTQQDILASTSLKSITSTRDSPL-- 82

Query: 98  XXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
              + +AR+    S YTF I+K GR ++RLYFFP     ++L++A F+V
Sbjct: 83  ---YSTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYEKYDLSAAKFAV 128


>Glyma13g40640.1 
          Length = 649

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           +F P  NYLIDCG++ +T +   R F +D           DL  + + I   T       
Sbjct: 26  TFVPVDNYLIDCGATASTSVGT-RNFIADNNK--------DLLSTQEDILATTSLKSVTS 76

Query: 97  XXX---XFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
                  +Q+ARV    S YTF I + GR ++RLYFFP     +NL++A F+V
Sbjct: 77  SSDDLPLYQTARVFTGSSKYTFKIKQKGRHWIRLYFFPSTYEKYNLSAADFTV 129


>Glyma12g34890.1 
          Length = 678

 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 11/110 (10%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           +F+P  NYLI CGSS +   +D RTF  D              + + + N          
Sbjct: 24  TFTPRDNYLIACGSSQSITSQD-RTFVPDSQHS---------SLKLKTGNSVVASSNSSV 73

Query: 97  XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
               +QSAR+  E+++Y F + + GR ++RLYF PLP+ + NLT+A  +V
Sbjct: 74  PSPIYQSARIFTEKASYRFQVEE-GRHWLRLYFSPLPNSAHNLTAAAITV 122


>Glyma15g04790.1 
          Length = 833

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 37  SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
           +F P  NYLIDCG++ +T +   R F +D             Q  + +   +        
Sbjct: 25  TFVPVDNYLIDCGATTSTSVGT-RNFIADNKDLLST------QKDIVATTSSKSATSSSD 77

Query: 97  XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
               +Q+ARV    S YTF I++ GR ++RLYF P     +NL +A F+V
Sbjct: 78  DSSLYQTARVFTASSKYTFKINQKGRHWIRLYFLPFAYEKYNLRAADFTV 127


>Glyma12g22660.1 
          Length = 784

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 101 FQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
           +QSARV  E+++Y F I + GR +VRLYF P+P+ + NLTSA  +V
Sbjct: 21  YQSARVFTEKASYRFKIQQEGRHWVRLYFSPIPNSAHNLTSASLTV 66