Miyakogusa Predicted Gene

Lj4g3v1658750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658750.1 Non Chatacterized Hit- tr|B1PIE4|B1PIE4_9CONI
Putative exonuclease family protein (Fragment)
OS=Cupr,43.69,7e-17,Ribonuclease H-like,Ribonuclease H-like domain; no
description,Exonuclease; SUBFAMILY NOT NAMED,NULL,CUFF.49553.1
         (465 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g00890.1                                                       732   0.0  
Glyma17g11030.1                                                       723   0.0  
Glyma08g14710.1                                                       266   3e-71
Glyma05g31480.1                                                       261   1e-69

>Glyma05g00890.1 
          Length = 501

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/500 (73%), Positives = 400/500 (80%), Gaps = 40/500 (8%)

Query: 6   AEDRSEIAFFDLETTVPTRPGQGFAILEFGAILVCPRKLTELRNYSTLVRPADLSLISPL 65
            E+RSEI FFD+ET+VPTR GQGFA+LEFGAILVCPR LTELR+YSTLVRPA+LS+I+PL
Sbjct: 2   GEERSEIVFFDVETSVPTRAGQGFALLEFGAILVCPRTLTELRDYSTLVRPANLSVITPL 61

Query: 66  SERCNGITPDAVSSAPTFADIADTVYDLLHGRIWAGHNIIRFDCVRLRDAFAAINQPPPE 125
           SERCNGI   AVS+APTFADIA  VYDLLHGRIWAGHNIIRFDCVR+RDAFA INQPPPE
Sbjct: 62  SERCNGINAAAVSAAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPE 121

Query: 126 PKGTIDSLVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 185
           PKGTIDSLVLLTQKFGRRAG+MKMATLATYFGLG+QTHRSLDDVRMNLEVLKYCATVLFL
Sbjct: 122 PKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFL 181

Query: 186 ESSLPDIFTENSWVSPNATTRSRSNGKSPSEGGLLNINKDTV------------------ 227
           ESSLPDIFT NSWVSPNATTRSRSNGKSPS+ GLLNINKD+V                  
Sbjct: 182 ESSLPDIFTANSWVSPNATTRSRSNGKSPSQWGLLNINKDSVLSSPATESKDKNRPIISF 241

Query: 228 ----------------------FNMLELKDRLNGESIQTDVAMDEKLLQDLPDTXXXXXX 265
                                 FN+  L+  +  ESI++DVA++EK +Q+  D       
Sbjct: 242 ALSSPKGNVSNIADPNMDQSDPFNLSTLEAEIKRESIKSDVALEEKPMQESTDLASSSSV 301

Query: 266 XXXXXXXXXVLELDEISIPAIDASLVPSFLGSQRIELHHNGFSFQLHCTGLKVRFGISTK 325
                    VLE D I IP+IDASLVPSF GSQRIEL H GF FQLHCT LKVRFGI++K
Sbjct: 302 SQPCSSSIAVLEPDGICIPSIDASLVPSFRGSQRIELLHEGFLFQLHCTDLKVRFGINSK 361

Query: 326 FVDSAGRPRLNFVVDASPSLCDVLDACDRVAQKLXXXXXXXXXWRPVVIRKEGFFNYPTI 385
           F DSAGRPRL+FVVD SPSLC+VLDACDRVAQKL         WRPVVIRKEGFFNYPT+
Sbjct: 362 FFDSAGRPRLSFVVDPSPSLCNVLDACDRVAQKLTVDSGSSSDWRPVVIRKEGFFNYPTV 421

Query: 386 RLHIPTAVFENVALYATEIYQRETSGTVQRLLFSKFDAAELGSMFMPGTFVDAFFSLDLY 445
           RLHIPTAV  ++A+YATEIYQRE+SGTVQRLLFSKFDAAELGS+FMPGTFVDA FSLD Y
Sbjct: 422 RLHIPTAVVADIAIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAVFSLDPY 481

Query: 446 DYQQSAGIKLVAKKLIIHSK 465
           DYQQ+AGIKLVAKKLIIHSK
Sbjct: 482 DYQQNAGIKLVAKKLIIHSK 501


>Glyma17g11030.1 
          Length = 501

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/500 (72%), Positives = 395/500 (79%), Gaps = 40/500 (8%)

Query: 6   AEDRSEIAFFDLETTVPTRPGQGFAILEFGAILVCPRKLTELRNYSTLVRPADLSLISPL 65
            EDRSEI FFD+ET+VPTR GQGFA+LEFGAILVCP+ LTELRNYSTLVRPA+LS+ISPL
Sbjct: 2   GEDRSEIVFFDVETSVPTRTGQGFALLEFGAILVCPKTLTELRNYSTLVRPANLSVISPL 61

Query: 66  SERCNGITPDAVSSAPTFADIADTVYDLLHGRIWAGHNIIRFDCVRLRDAFAAINQPPPE 125
           SERCNGIT  AVS+AP+FADIA  VYDLLHGRIWAGHNIIRFDCVR+RDAFA INQPPPE
Sbjct: 62  SERCNGITAAAVSAAPSFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPE 121

Query: 126 PKGTIDSLVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 185
           PKGTIDSLVLLTQKFGRRAG+MKMATLATYFGLG+QTHRSLDDVRMNLEVLKYCATVLFL
Sbjct: 122 PKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFL 181

Query: 186 ESSLPDIFTENSWVSPNATTRSRSNGKSPSEGGLLNINKDTV------------------ 227
           ESSLPDIFT NSWVSPN+ TRSRSN KS S+GGLLNINKD+V                  
Sbjct: 182 ESSLPDIFTANSWVSPNSITRSRSNEKSLSQGGLLNINKDSVLSSPATESKDKNHPIISF 241

Query: 228 ----------------------FNMLELKDRLNGESIQTDVAMDEKLLQDLPDTXXXXXX 265
                                 FN+  L+  +  ESI++D AM+EK +Q+ PD       
Sbjct: 242 ALSSLKGNVPNIADPNIDQSDPFNLSALEAEIKRESIKSDAAMEEKTMQESPDLASSSSV 301

Query: 266 XXXXXXXXXVLELDEISIPAIDASLVPSFLGSQRIELHHNGFSFQLHCTGLKVRFGISTK 325
                    VLE D I IP IDASLVPSFLGSQRIEL H GF F LHCT LKVRFGI+++
Sbjct: 302 SQPCSSSIAVLEPDGICIPFIDASLVPSFLGSQRIELLHEGFPFLLHCTDLKVRFGINSR 361

Query: 326 FVDSAGRPRLNFVVDASPSLCDVLDACDRVAQKLXXXXXXXXXWRPVVIRKEGFFNYPTI 385
           F D AGRPRL+FVVD SPSLC+VLDACDRVAQKL         WRPVVIRKEGFFNYPTI
Sbjct: 362 FFDRAGRPRLSFVVDPSPSLCNVLDACDRVAQKLNMDSGSSSDWRPVVIRKEGFFNYPTI 421

Query: 386 RLHIPTAVFENVALYATEIYQRETSGTVQRLLFSKFDAAELGSMFMPGTFVDAFFSLDLY 445
           RLHIPTAV  +V +YATEIYQRE+SGTVQRLLFSKFDAAELGS+FMPGTFVDAF SLD Y
Sbjct: 422 RLHIPTAVVADVDIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAFLSLDPY 481

Query: 446 DYQQSAGIKLVAKKLIIHSK 465
           DYQQ+AGIKLV+KKLIIH K
Sbjct: 482 DYQQNAGIKLVSKKLIIHGK 501


>Glyma08g14710.1 
          Length = 229

 Score =  266 bits (681), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 130/199 (65%), Positives = 161/199 (80%)

Query: 11  EIAFFDLETTVPTRPGQGFAILEFGAILVCPRKLTELRNYSTLVRPADLSLISPLSERCN 70
           EI FFDLETTVP + G+ F +LEFGAI+V P KLTE+ +Y+TL+RP DLS++S  S R +
Sbjct: 2   EIVFFDLETTVPKKGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSD 61

Query: 71  GITPDAVSSAPTFADIADTVYDLLHGRIWAGHNIIRFDCVRLRDAFAAINQPPPEPKGTI 130
           GIT  AV +AP+F D+AD ++ +L+GR+WAGHNI RFDCVR+++AF  IN+P P P G I
Sbjct: 62  GITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFDDINRPAPVPVGII 121

Query: 131 DSLVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLP 190
           DSL +LT+KFGRRAGNMKMATLA+YFGLGQQ HRSLDDVRMNLEVLK+CATVLFLESSLP
Sbjct: 122 DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLP 181

Query: 191 DIFTENSWVSPNATTRSRS 209
           ++    S  SP+  T  +S
Sbjct: 182 NMLHSKSHGSPSEETSRKS 200


>Glyma05g31480.1 
          Length = 227

 Score =  261 bits (668), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/201 (63%), Positives = 159/201 (79%), Gaps = 1/201 (0%)

Query: 11  EIAFFDLETTVPTRPGQGFAILEFGAILVCPRKLTELRNYSTLVRPADLSLISPLSERCN 70
           EI FFDLETTVP R G+ F +LEFGAI+V P KLTE+ +Y+TL+RP DLS++S  S R +
Sbjct: 2   EIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSD 61

Query: 71  GITPDAVSSAPTFADIADTVYDLLHGRIWAGHNIIRFDCVRLRDAFAAINQPPPEPKGTI 130
           GIT  AV +AP+F D+AD ++ +L+GR+WAGHNI RFDCVR+++AF  IN+  P P G I
Sbjct: 62  GITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFNDINRSAPVPVGII 121

Query: 131 DSLVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLP 190
           DSL +LT+KFGRRAGNMKMATLA+YFGLGQQ HRSLDDVRMNLEVLK+CATVLFLESSLP
Sbjct: 122 DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLP 181

Query: 191 DIFTENSWVSPNATTRSRSNG 211
           +    + W   ++ T   + G
Sbjct: 182 NTL-HSKWYGSSSRTVPYARG 201