Miyakogusa Predicted Gene

Lj4g3v1616870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1616870.1 tr|Q9SHG3|Q9SHG3_ARATH F20D23.26 protein
OS=Arabidopsis thaliana GN=F20D23.26 PE=4 SV=1,41.5,1e-16,SH2,SH2
domain; SH2 domain,NULL; SIGNAL TRANSDUCER AND ACTIVATOR OF
TRANSCRIPTION,NULL; SIGNAL TRANS,CUFF.49493.1
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g27770.1                                                       374   e-104
Glyma15g27760.1                                                        63   4e-10

>Glyma15g27770.1 
          Length = 238

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/210 (82%), Positives = 189/210 (90%)

Query: 138 YSGCSHHGNQILLAKRLIEDGTNLWKVLSPNNHHVSWESAVYEIEEKFMKIASCDSRSLS 197
           Y  C +  NQILLAKRLI+DGTNLWKV+SPNNHH+ WE+AVYEIEE+FMKIASC SRSLS
Sbjct: 29  YYLCFYIRNQILLAKRLIKDGTNLWKVMSPNNHHIPWENAVYEIEEQFMKIASCCSRSLS 88

Query: 198 HQDLELLRRIAGCQEYLTQESFEKLWCWVYPVAFTISRDLINPIWNSVAPKWIEGLITKE 257
            QDL LLRRIAGCQEYLTQE+FEKLWCW+YPVAF ISRD INPIWNS +PKWIEG ITKE
Sbjct: 89  PQDLNLLRRIAGCQEYLTQENFEKLWCWLYPVAFIISRDWINPIWNSTSPKWIEGFITKE 148

Query: 258 EAEASLRGPAGFQEPGTFTLRFPTSRSWPHPDAGCLIVTYVGNDYKIHHRLLSMDHAYGS 317
           EAE+SL+GP GFQEPGTF LRFPTSRSWPHPDAG L+V+YVGNDYK+HHRLLSM H YGS
Sbjct: 149 EAESSLQGPTGFQEPGTFILRFPTSRSWPHPDAGNLVVSYVGNDYKLHHRLLSMHHVYGS 208

Query: 318 GDKRTDMKPLQDMLLEEPELSRLGRIIRSH 347
           GD R D+KPLQDMLL EPELSRLGRIIRSH
Sbjct: 209 GDNRVDVKPLQDMLLAEPELSRLGRIIRSH 238


>Glyma15g27760.1 
          Length = 415

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 38/57 (66%), Gaps = 7/57 (12%)

Query: 1   MVDESLEHMQCGLESTANPLVKRFRVGHDKISVSV-------QPDEECNSHVWTANQ 50
           M D SL+      E+ ANPL+KRFR+G DK SVSV       QPDEECNSHV TANQ
Sbjct: 359 MDDRSLDLQHSSHEAQANPLMKRFRLGQDKTSVSVKADPTIEQPDEECNSHVRTANQ 415